Project name: 4i5b_ABDE_KMSEHILLL

Status: done

submitted: 2023-06-03 09:01:08, status changed: 2023-06-04 12:05:44

Project settings
Peptide sequence KMSEHILLL
Simulation mc cycles50
Peptide secondary structure psipred CCCCCEEEC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 38.5175 1.5837 5.22043 61
cluster_2.pdb ( medoid) 29.2775 3.55222 41.862 104
cluster_3.pdb ( medoid) 28.5808 1.71443 6.073 49
cluster_4.pdb ( medoid) 26.1161 7.92613 38.4483 207
cluster_5.pdb ( medoid) 22.426 5.97522 21.2949 134
cluster_6.pdb ( medoid) 20.9748 11.1562 42.1977 234
cluster_7.pdb ( medoid) 12.3703 6.0629 16.3056 75
cluster_8.pdb ( medoid) 10.6104 5.08932 9.65701 54
cluster_9.pdb ( medoid) 8.81854 3.40192 6.7 30
cluster_10.pdb ( medoid) 3.32422 15.6428 49.6734 52