Project name: 2YQL unbound default A ARTKQTARKS ss: CCCCCCCCCC

Status: done

submitted: 2015-02-20 17:44:49, status changed: 2015-03-13 11:05:07

Project settings
Peptide sequence ARTKQTARKS
Simulation mc cycles50
Peptide secondary structure CCCCCCCCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 34.6584 5.65519 20.4773 196
cluster_2.pdb ( medoid) 24.3783 5.66077 18.485 138
cluster_3.pdb ( medoid) 22.5563 5.18703 12.6704 117
cluster_4.pdb ( medoid) 22.0844 6.92795 16.9613 153
cluster_5.pdb ( medoid) 11.2221 6.77236 21.4919 76
cluster_6.pdb ( medoid) 11.2105 6.33337 15.0714 71
cluster_7.pdb ( medoid) 8.25923 9.80721 19.1275 81
cluster_8.pdb ( medoid) 6.71518 10.722 23.9646 72
cluster_9.pdb ( medoid) 5.93263 8.93364 18.4389 53
cluster_10.pdb ( medoid) 4.99657 8.6059 18.8512 43
Laboratory of Theory of Biopolymers 2015