Project name: H18E5OK7Ld 1ldp

Status: done

submitted: 2018-01-10 06:20:14, status changed: 2018-01-11 08:35:14

Project settings
Peptide sequence MLLLHIHAI
Simulation mc cycles200
Peptide secondary structure psipred CEEEEEEEC
Unlikely to bind regions
1:L - 99:L 177:H - 272:H
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 49.1176 3.78683 33.1421 186
cluster_2.pdb ( medoid) 47.4932 2.18979 5.80884 104
cluster_3.pdb ( medoid) 34.6599 5.27987 37.038 183
cluster_4.pdb ( medoid) 27.1558 2.43042 4.42216 66
cluster_5.pdb ( medoid) 22.7011 3.08355 40.8622 70
cluster_6.pdb ( medoid) 19.1028 7.11939 45.0388 136
cluster_7.pdb ( medoid) 15.5764 3.46679 25.6182 54
cluster_8.pdb ( medoid) 12.9726 5.31891 35.0589 69
cluster_9.pdb ( medoid) 6.38204 14.2588 51.5429 91
cluster_10.pdb ( medoid) 1.17194 34.9847 69.5135 41

Laboratory of Theory of Biopolymers 2015