Project name: 1hc9 bound default A WRYYESSLLPYPD ss: CEEECCEEEEECC

Status: done

submitted: 2015-02-19 18:28:12, status changed: 2015-03-13 11:07:37

Project settings
Peptide sequence WRYYESSLLPYPD
Simulation mc cycles50
Peptide secondary structure CEEECCEEEEECC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 66.4627 1.62497 10.2696 108
cluster_2.pdb ( medoid) 43.1893 5.18647 17.8714 224
cluster_3.pdb ( medoid) 21.9575 7.56005 23.5063 166
cluster_4.pdb ( medoid) 21.9307 4.55982 15.4762 100
cluster_5.pdb ( medoid) 20.5066 4.87649 12.3557 100
cluster_6.pdb ( medoid) 11.5546 5.53894 17.273 64
cluster_7.pdb ( medoid) 11.3577 3.34574 15.7834 38
cluster_8.pdb ( medoid) 10.4293 5.56123 17.1326 58
cluster_9.pdb ( medoid) 8.59596 9.07403 20.3869 78
cluster_10.pdb ( medoid) 5.26425 12.1575 35.9372 64
Laboratory of Theory of Biopolymers 2015