Project name: 7bdc63159344156

Status: done

submitted: 2018-01-10 10:34:50, status changed: 2018-01-10 10:56:46

Project settings
Peptide sequence WKIY
Simulation mc cycles50
Peptide secondary structure psipred CCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 43.938 3.98289 13.614 175
cluster_2.pdb ( medoid) 36.7978 4.1035 28.7034 151
cluster_3.pdb ( medoid) 22.5201 3.33036 9.00831 75
cluster_4.pdb ( medoid) 21.3734 7.67309 24.0258 164
cluster_5.pdb ( medoid) 20.9493 4.96436 21.4506 104
cluster_6.pdb ( medoid) 16.7236 3.22898 20.542 54
cluster_7.pdb ( medoid) 11.6687 6.85593 20.1156 80
cluster_8.pdb ( medoid) 9.86322 7.19846 19.4376 71
cluster_9.pdb ( medoid) 8.16976 7.71137 21.9342 63
cluster_10.pdb ( medoid) 6.96013 9.05155 25.8625 63

Laboratory of Theory of Biopolymers 2015