Project name: 7cec213bfb08484

Status: done

submitted: 2018-07-09 07:07:50, status changed: 2018-07-24 05:13:35

Project settings
Peptide sequence SFGDGFADF
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 39.6605 2.84918 9.77896 113
cluster_2.pdb ( medoid) 32.6343 4.07547 39.1902 133
cluster_3.pdb ( medoid) 25.9924 5.27077 29.6362 137
cluster_4.pdb ( medoid) 21.4521 5.87355 11.7461 126
cluster_5.pdb ( medoid) 20.7892 2.93421 9.42775 61
cluster_6.pdb ( medoid) 18.6557 5.5747 12.5297 104
cluster_7.pdb ( medoid) 17.5121 10.3357 42.6843 181
cluster_8.pdb ( medoid) 15.7795 4.3094 9.63477 68
cluster_9.pdb ( medoid) 9.41265 5.63072 11.1577 53
cluster_10.pdb ( medoid) 1.65676 14.4861 28.2151 24

Laboratory of Theory of Biopolymers 2015