Project name: 2d0n bound default 2 runC PSIDRSTKP ss: CCCCHHHCC

Status: done

submitted: 2015-02-23 11:18:38, status changed: 2015-03-13 11:08:53

Project settings
Peptide sequence PSIDRSTKP
Simulation mc cycles50
Peptide secondary structure CCCCHHHCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 31.8336 6.12561 19.7698 195
cluster_2.pdb ( medoid) 29.5709 6.86486 26.7168 203
cluster_3.pdb ( medoid) 16.5991 10.2415 20.5623 170
cluster_4.pdb ( medoid) 15.9627 7.2043 17.8041 115
cluster_5.pdb ( medoid) 13.5134 7.25206 17.5876 98
cluster_6.pdb ( medoid) 13.3665 3.51625 10.8762 47
cluster_7.pdb ( medoid) 9.33254 6.42912 21.1124 60
cluster_8.pdb ( medoid) 4.67028 10.2777 22.8808 48
cluster_9.pdb ( medoid) 4.08871 10.7613 30.3196 44
cluster_10.pdb ( medoid) 2.26484 8.83065 19.6858 20
Laboratory of Theory of Biopolymers 2015