Project name: 2p54 bound default 2 runA ARHKILHRLLQE ss: CCCHHHHHHHHC

Status: done

submitted: 2015-02-23 11:18:43, status changed: 2015-03-13 11:10:09

Project settings
Peptide sequence ARHKILHRLLQE
Simulation mc cycles50
Peptide secondary structure CCCHHHHHHHHC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
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model_4 Download
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model_7 Download
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model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
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replica_4 Download
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replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 28.2485 3.1152 10.5983 88
cluster_2.pdb ( medoid) 26.0879 5.02148 12.2915 131
cluster_3.pdb ( medoid) 26.0791 6.25022 30.0257 163
cluster_4.pdb ( medoid) 21.9071 6.02545 30.1531 132
cluster_5.pdb ( medoid) 14.1287 5.87458 35.0787 83
cluster_6.pdb ( medoid) 13.7663 10.2424 40.304 141
cluster_7.pdb ( medoid) 10.1968 6.37455 12.8669 65
cluster_8.pdb ( medoid) 8.21377 6.69607 21.9068 55
cluster_9.pdb ( medoid) 5.8117 6.02233 12.114 35
cluster_10.pdb ( medoid) 5.70086 18.7691 47.6043 107
Laboratory of Theory of Biopolymers 2015