Project name: 1JWF unbound default A DLLHI ss: CCCCC

Status: done

submitted: 2015-02-20 17:44:34, status changed: 2015-03-13 11:11:10

Project settings
Peptide sequence DLLHI
Simulation mc cycles50
Peptide secondary structure CCCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 50.7017 3.76713 26.2862 191
cluster_2.pdb ( medoid) 43.2842 3.21133 8.13477 139
cluster_3.pdb ( medoid) 39.385 3.35153 22.7791 132
cluster_4.pdb ( medoid) 31.6793 3.2829 8.41891 104
cluster_5.pdb ( medoid) 20.3377 5.99871 29.6079 122
cluster_6.pdb ( medoid) 18.408 4.72622 17.8047 87
cluster_7.pdb ( medoid) 17.806 4.04359 12.0802 72
cluster_8.pdb ( medoid) 7.3954 5.67921 17.1675 42
cluster_9.pdb ( medoid) 6.4969 8.31165 26.4626 54
cluster_10.pdb ( medoid) 4.5242 12.5989 35.4711 57
Laboratory of Theory of Biopolymers 2015