Project name: 2H14 unbound default 3 run A ARTKQ ss: CCCCC

Status: done

submitted: 2015-02-25 18:47:39, status changed: 2015-03-13 11:13:09

Project settings
Peptide sequence ARTKQ
Simulation mc cycles50
Peptide secondary structure CCCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 61.9979 2.32266 21.5905 144
cluster_2.pdb ( medoid) 34.2218 4.90915 24.3104 168
cluster_3.pdb ( medoid) 28.2714 4.27994 30.1634 121
cluster_4.pdb ( medoid) 21.0011 5.42829 40.0628 114
cluster_5.pdb ( medoid) 15.4266 7.13054 28.0353 110
cluster_6.pdb ( medoid) 14.9594 2.67391 19.8873 40
cluster_7.pdb ( medoid) 11.0081 8.90256 30.0094 98
cluster_8.pdb ( medoid) 9.99483 8.60445 36.7821 86
cluster_9.pdb ( medoid) 5.01771 10.9612 29.9904 55
cluster_10.pdb ( medoid) 4.12382 15.5196 36.2545 64
Laboratory of Theory of Biopolymers 2015