Project name: 9f4e22cfb921d4

Status: done

submitted: 2018-01-10 18:39:42, status changed: 2018-01-10 21:12:05

Project settings
Simulation mc cycles50
Peptide secondary structure psipred CCCCEEEECCCCCCCCCCCEEHHHHHHHCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 29.5438 5.9234 27.5168 175
cluster_2.pdb ( medoid) 25.2754 4.07511 22.4167 103
cluster_3.pdb ( medoid) 19.7777 5.30902 11.7697 105
cluster_4.pdb ( medoid) 15.7863 8.04497 22.8582 127
cluster_5.pdb ( medoid) 13.4326 6.99792 21.1658 94
cluster_6.pdb ( medoid) 13.2555 8.44929 29.9618 112
cluster_7.pdb ( medoid) 12.2157 9.65968 29.8867 118
cluster_8.pdb ( medoid) 9.28488 9.37007 18.6361 87
cluster_9.pdb ( medoid) 3.0182 17.5602 29.8629 53
cluster_10.pdb ( medoid) 2.14088 12.1445 29.3529 26

Laboratory of Theory of Biopolymers 2015