Project name: 3NSQ unbound default 2 run A HKILHRLLQD ss: CHHHHHHHHC

Status: done

submitted: 2015-02-25 18:46:57, status changed: 2015-03-13 11:15:14

Project settings
Peptide sequence HKILHRLLQD
Simulation mc cycles50
Peptide secondary structure CHHHHHHHHC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
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model_4 Download
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model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 59.0108 1.62682 11.0924 96
cluster_2.pdb ( medoid) 39.6902 1.99041 9.43988 79
cluster_3.pdb ( medoid) 30.1185 5.44517 29.3483 164
cluster_4.pdb ( medoid) 30.065 1.13088 6.18824 34
cluster_5.pdb ( medoid) 24.1444 4.47308 12.925 108
cluster_6.pdb ( medoid) 21.9423 5.87905 19.6359 129
cluster_7.pdb ( medoid) 18.4732 9.41905 28.4162 174
cluster_8.pdb ( medoid) 13.3065 7.13937 13.9275 95
cluster_9.pdb ( medoid) 11.787 6.70228 17.5455 79
cluster_10.pdb ( medoid) 7.30124 5.75245 14.7565 42
Laboratory of Theory of Biopolymers 2015