Project name: MYCMYB_4RS9

Status: done

submitted: 2018-07-11 15:33:00, status changed: 2018-07-26 10:30:35

Project settings
Simulation mc cycles200
Peptide secondary structure psipred CCCCHHHHHHHHHHHHHHHHCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 35.9022 6.01635 38.924 216
cluster_2.pdb ( medoid) 27.5016 7.2723 21.356 200
cluster_3.pdb ( medoid) 22.5348 5.81322 36.0298 131
cluster_4.pdb ( medoid) 20.7651 3.90077 19.6827 81
cluster_5.pdb ( medoid) 18.217 4.77576 20.263 87
cluster_6.pdb ( medoid) 12.2027 3.68772 16.1374 45
cluster_7.pdb ( medoid) 10.8838 5.69652 33.9425 62
cluster_8.pdb ( medoid) 8.95939 7.14334 21.9765 64
cluster_9.pdb ( medoid) 5.73738 12.2007 44.3046 70
cluster_10.pdb ( medoid) 4.79558 9.17512 39.4364 44

Laboratory of Theory of Biopolymers 2015