Project name: 2puy bound default 2 runB ARTKQTARKS ss: CCEEEECCCC

Status: done

submitted: 2015-02-23 11:18:43, status changed: 2015-03-13 11:16:34

Project settings
Peptide sequence ARTKQTARKS
Simulation mc cycles50
Peptide secondary structure CCEEEECCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 70.4527 2.18586 6.45113 154
cluster_2.pdb ( medoid) 22.6777 8.11371 21.6445 184
cluster_3.pdb ( medoid) 19.194 6.72084 25.2286 129
cluster_4.pdb ( medoid) 13.8816 8.21228 28.4682 114
cluster_5.pdb ( medoid) 11.7572 11.2272 22.3575 132
cluster_6.pdb ( medoid) 9.20181 8.15057 20.2674 75
cluster_7.pdb ( medoid) 6.19687 9.03682 21.763 56
cluster_8.pdb ( medoid) 6.16828 7.13326 15.1782 44
cluster_9.pdb ( medoid) 6.00722 8.65624 21.4505 52
cluster_10.pdb ( medoid) 5.04023 11.9042 21.1871 60
Laboratory of Theory of Biopolymers 2015