Project name: ab8e4993cbd9552

Status: done

submitted: 2018-07-08 06:23:50, status changed: 2018-07-23 01:08:36

Project settings
Peptide sequence DGASPDYVLMEAEA
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCEEEEEECC
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 43.018 3.62639 12.7257 156
cluster_2.pdb ( medoid) 32.1208 6.1331 25.0007 197
cluster_3.pdb ( medoid) 31.2921 2.94004 8.69844 92
cluster_4.pdb ( medoid) 22.417 7.80659 30.6473 175
cluster_5.pdb ( medoid) 15.8223 4.99295 13.8143 79
cluster_6.pdb ( medoid) 15.4035 4.93395 19.56 76
cluster_7.pdb ( medoid) 13.6256 7.48592 29.9622 102
cluster_8.pdb ( medoid) 3.88963 6.94154 14.0578 27
cluster_9.pdb ( medoid) 3.86268 18.381 36.3383 71
cluster_10.pdb ( medoid) 3.26197 7.66408 23.1146 25

Laboratory of Theory of Biopolymers 2015