Project name: adfa3069c4dfcab

Status: done

submitted: 2018-10-12 07:50:17, status changed: 2018-10-12 09:10:27

Project settings
Peptide sequence HDSPTAA
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCC
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 29.4931 6.0014 17.0938 177
cluster_2.pdb ( medoid) 23.1919 6.46776 16.9472 150
cluster_3.pdb ( medoid) 21.8689 3.97826 10.087 87
cluster_4.pdb ( medoid) 21.7236 6.39856 18.2438 139
cluster_5.pdb ( medoid) 19.35 6.87339 24.7279 133
cluster_6.pdb ( medoid) 12.9735 5.70394 13.9242 74
cluster_7.pdb ( medoid) 10.8947 6.60873 13.2714 72
cluster_8.pdb ( medoid) 8.77195 8.43598 23.6064 74
cluster_9.pdb ( medoid) 7.13045 8.97559 28.0098 64
cluster_10.pdb ( medoid) 4.48149 6.69421 23.306 30

Laboratory of Theory of Biopolymers 2015