Project name: 1xkk2

Status: done

submitted: 2023-06-01 22:35:39, status changed: 2023-06-02 06:25:08

Project settings
Peptide sequence GVISDAYRL
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCCC
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 19.1477 6.31929 33.5922 121
cluster_2.pdb ( medoid) 16.0228 8.36306 35.1008 134
cluster_3.pdb ( medoid) 15.3039 9.80142 44.5821 150
cluster_4.pdb ( medoid) 11.8087 12.1944 34.4401 144
cluster_5.pdb ( medoid) 9.03916 12.1693 30.025 110
cluster_6.pdb ( medoid) 8.19367 13.0589 30.8647 107
cluster_7.pdb ( medoid) 7.01054 9.41439 23.3999 66
cluster_8.pdb ( medoid) 4.35571 18.3667 37.7321 80
cluster_9.pdb ( medoid) 3.52352 13.3389 35.6861 47
cluster_10.pdb ( medoid) 2.63493 15.5602 37.8639 41