Project name: bddb4481dd00fbc

Status: done

submitted: 2018-01-11 09:21:10, status changed: 2018-01-11 13:28:59

Project settings
Peptide sequence WEFWEF
Simulation mc cycles50
Peptide secondary structure psipred CCCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 26.5079 4.60239 18.7741 122
cluster_2.pdb ( medoid) 24.3327 3.65764 20.5869 89
cluster_3.pdb ( medoid) 23.1735 4.22898 12.6517 98
cluster_4.pdb ( medoid) 21.0472 4.13356 9.57028 87
cluster_5.pdb ( medoid) 20.337 2.90112 22.8141 59
cluster_6.pdb ( medoid) 20.0024 5.39935 28.1234 108
cluster_7.pdb ( medoid) 19.8261 9.78507 29.9902 194
cluster_8.pdb ( medoid) 15.719 5.98001 18.7052 94
cluster_9.pdb ( medoid) 9.03389 7.85929 23.597 71
cluster_10.pdb ( medoid) 7.84776 9.93914 32.0242 78

Laboratory of Theory of Biopolymers 2015