Project name: 1xkk3

Status: done

submitted: 2023-06-01 22:32:54, status changed: 2023-06-02 06:27:07

Project settings
Peptide sequence VISDAYRLK
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCCC
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 21.1954 9.76626 40.9755 207
cluster_2.pdb ( medoid) 19.3291 7.39818 32.7158 143
cluster_3.pdb ( medoid) 17.1123 8.18127 31.1288 140
cluster_4.pdb ( medoid) 13.9632 8.52242 25.8466 119
cluster_5.pdb ( medoid) 11.7693 8.07185 22.6698 95
cluster_6.pdb ( medoid) 10.9516 5.29604 18.1228 58
cluster_7.pdb ( medoid) 10.7982 5.92693 29.6826 64
cluster_8.pdb ( medoid) 5.12355 16.5901 39.3354 85
cluster_9.pdb ( medoid) 4.05423 12.3328 29.5467 50
cluster_10.pdb ( medoid) 3.57835 10.8989 31.2288 39