Project name: H18E5OK7IEk 1fng

Status: done

submitted: 2018-01-10 06:33:52, status changed: 2018-01-11 09:11:43

Project settings
Protein sequence(s) IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFEERPWFLEYCKSECHFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTELGRPDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPRRVEPTVTVYPTKTQPLEHHNLLVCSVSDFYPGNIEVRWFRNGKEEKTGIVSTGLVRNGDWTFQTLVMLETVPQSGEVYTCQVEHPSLTDPVTVEW input pdb
Peptide sequence MLLLHIHAI
Simulation mc cycles200
Peptide secondary structure psipred CEEEEEEEC
Unlikely to bind regions
188:B - 93:B 182:A - 80:A
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download
 

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
Trajectories
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 78.1274 1.42076 12.2872 111
cluster_2.pdb ( medoid) 49.9754 2.88142 15.7603 144
cluster_3.pdb ( medoid) 45.3348 4.78661 15.1918 217
cluster_4.pdb ( medoid) 44.8873 3.47537 27.7788 156
cluster_5.pdb ( medoid) 30.8256 2.85477 28.0289 88
cluster_6.pdb ( medoid) 15.5157 6.76735 28.2174 105
cluster_7.pdb ( medoid) 13.7447 1.01858 4.70858 14
cluster_8.pdb ( medoid) 11.3262 9.18223 21.466 104
cluster_9.pdb ( medoid) 2.48484 13.2806 28.7404 33
cluster_10.pdb ( medoid) 1.92316 14.5594 34.9461 28

 
Laboratory of Theory of Biopolymers 2015