Project name: d15777701cbb0a3

Status: done

submitted: 2018-01-11 11:47:01, status changed: 2018-01-11 13:15:58

Project settings
Peptide sequence LAHIM
Simulation mc cycles50
Peptide secondary structure psipred CCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 34.3859 4.71123 23.0901 162
cluster_2.pdb ( medoid) 23.4657 5.28432 23.1518 124
cluster_3.pdb ( medoid) 23.3194 6.08934 22.6628 142
cluster_4.pdb ( medoid) 20.3011 7.19171 25.5107 146
cluster_5.pdb ( medoid) 18.1098 5.96364 21.6544 108
cluster_6.pdb ( medoid) 12.9379 8.03842 29.9997 104
cluster_7.pdb ( medoid) 11.4281 7.08777 20.19 81
cluster_8.pdb ( medoid) 4.85463 9.88747 23.6248 48
cluster_9.pdb ( medoid) 4.33889 10.8323 24.4428 47
cluster_10.pdb ( medoid) 3.15313 12.0515 28.9067 38

Laboratory of Theory of Biopolymers 2015