Project name: d4736a5b8019b08

Status: done

submitted: 2018-07-05 12:42:17, status changed: 2018-07-20 16:39:04

Project settings
Peptide sequence CRLIIF
Simulation mc cycles50
Peptide secondary structure psipred CEEEEC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 48.4454 4.3967 14.4254 213
cluster_2.pdb ( medoid) 42.8154 2.33561 8.15548 100
cluster_3.pdb ( medoid) 29.7303 3.39721 12.4152 101
cluster_4.pdb ( medoid) 18.1696 8.6408 23.1959 157
cluster_5.pdb ( medoid) 16.2664 7.19275 30.613 117
cluster_6.pdb ( medoid) 11.6254 7.48365 22.0625 87
cluster_7.pdb ( medoid) 10.1804 5.99193 15.7565 61
cluster_8.pdb ( medoid) 9.84028 8.63797 28.0946 85
cluster_9.pdb ( medoid) 5.06014 10.6716 20.6482 54
cluster_10.pdb ( medoid) 2.87117 8.70726 16.8043 25

Laboratory of Theory of Biopolymers 2015