Project name: e5384fccd9164df

Status: done

submitted: 2018-07-10 06:35:20, status changed: 2018-07-24 15:50:33

Project settings
Peptide sequence QEFSPNLWGLEF
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCCCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 62.6507 1.75577 4.61741 110
cluster_2.pdb ( medoid) 42.1209 0.569788 1.74328 24
cluster_3.pdb ( medoid) 35.8241 2.40062 12.1411 86
cluster_4.pdb ( medoid) 20.5081 4.97365 28.3444 102
cluster_5.pdb ( medoid) 17.3658 8.34972 31.0111 145
cluster_6.pdb ( medoid) 13.7279 10.4896 30.8463 144
cluster_7.pdb ( medoid) 13.4092 9.91857 42.3466 133
cluster_8.pdb ( medoid) 10.3358 8.41733 32.2267 87
cluster_9.pdb ( medoid) 6.02287 13.1167 42.5226 79
cluster_10.pdb ( medoid) 4.53671 19.8381 45.8533 90

Laboratory of Theory of Biopolymers 2015