Project name: 3HAU unbound default 2 run AB RQVNFLG ss: CCCCCCC

Status: done

submitted: 2015-02-25 18:46:55, status changed: 2015-03-13 11:30:08

Project settings
Peptide sequence RQVNFLG
Simulation mc cycles50
Peptide secondary structure CCCCCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 47.6284 4.49312 27.5102 214
cluster_2.pdb ( medoid) 29.3694 2.28128 8.56006 67
cluster_3.pdb ( medoid) 23.0563 6.76604 38.4527 156
cluster_4.pdb ( medoid) 16.7854 6.3746 39.0185 107
cluster_5.pdb ( medoid) 16.7383 4.12227 21.1897 69
cluster_6.pdb ( medoid) 12.8351 3.27227 13.4313 42
cluster_7.pdb ( medoid) 12.5267 10.6173 38.9609 133
cluster_8.pdb ( medoid) 9.97301 9.32517 46.8653 93
cluster_9.pdb ( medoid) 7.68352 11.0626 36.6313 85
cluster_10.pdb ( medoid) 1.56321 21.7501 53.59 34
Laboratory of Theory of Biopolymers 2015