Project name: f40d00686baa719

Status: done

submitted: 2018-07-05 12:42:47, status changed: 2018-07-20 18:22:31

Project settings
Peptide sequence VEITPNSPRAEA
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCCCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 44.2308 2.66782 15.2727 118
cluster_2.pdb ( medoid) 24.2929 4.98087 14.322 121
cluster_3.pdb ( medoid) 20.1683 7.09033 18.7785 143
cluster_4.pdb ( medoid) 18.5688 6.62402 23.0828 123
cluster_5.pdb ( medoid) 16.7995 5.29777 11.7933 89
cluster_6.pdb ( medoid) 13.8235 6.2213 36.4891 86
cluster_7.pdb ( medoid) 12.1512 9.54637 33.053 116
cluster_8.pdb ( medoid) 9.23734 10.6091 37.9487 98
cluster_9.pdb ( medoid) 7.24924 9.79413 29.289 71
cluster_10.pdb ( medoid) 5.82434 6.00926 18.0081 35

Laboratory of Theory of Biopolymers 2015