Project name: ANGIOGENIN3

Status: done

submitted: 2018-01-10 17:12:05, status changed: 2018-01-10 19:21:49

Project settings
Peptide sequence WHSPWRSWEVRS
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCEEECC
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 28.684 9.27347 32.469 266
cluster_2.pdb ( medoid) 24.717 4.65266 13.6983 115
cluster_3.pdb ( medoid) 15.6325 5.30944 14.3599 83
cluster_4.pdb ( medoid) 15.2336 9.38716 33.0581 143
cluster_5.pdb ( medoid) 15.1523 7.72158 25.9461 117
cluster_6.pdb ( medoid) 8.41251 5.46805 14.5336 46
cluster_7.pdb ( medoid) 5.95433 13.4356 34.2383 80
cluster_8.pdb ( medoid) 3.85636 17.8925 43.8524 69
cluster_9.pdb ( medoid) 3.55949 13.2041 31.7752 47
cluster_10.pdb ( medoid) 2.15856 15.7513 36.297 34

Laboratory of Theory of Biopolymers 2015