Project name: 2p1t bound default 3 runA HKILHRLLQD ss: CHHHHHHHHC

Status: done

submitted: 2015-02-23 11:19:17, status changed: 2015-03-13 11:30:52

Project settings
Peptide sequence HKILHRLLQD
Simulation mc cycles50
Peptide secondary structure CHHHHHHHHC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
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model_4 Download
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model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
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replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 38.049 2.54934 28.4566 97
cluster_2.pdb ( medoid) 37.7501 1.98675 8.48679 75
cluster_3.pdb ( medoid) 37.419 3.76814 13.3931 141
cluster_4.pdb ( medoid) 30.8605 5.37905 29.7813 166
cluster_5.pdb ( medoid) 25.915 5.6724 17.5047 147
cluster_6.pdb ( medoid) 14.5684 9.81575 44.1924 143
cluster_7.pdb ( medoid) 12.3345 6.64801 13.6098 82
cluster_8.pdb ( medoid) 6.39615 12.9766 37.9255 83
cluster_9.pdb ( medoid) 5.01444 5.98272 22.8709 30
cluster_10.pdb ( medoid) 2.32367 15.4928 31.5037 36
Laboratory of Theory of Biopolymers 2015