Project name: 2b1z bound default 2 runB KILHRLLQD ss: CHHHHHHHC

Status: done

submitted: 2015-02-23 11:18:37, status changed: 2015-03-13 11:31:47

Project settings
Protein sequence(s) SLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLKSLEKDHIHRVLDKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLSDLLLEMLDAH input pdb
Peptide sequence KILHRLLQD
Simulation mc cycles50
Peptide secondary structure CHHHHHHHC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download
 

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
Trajectories
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 78.3358 2.14461 10.4169 168
cluster_2.pdb ( medoid) 46.617 2.38111 9.60434 111
cluster_3.pdb ( medoid) 32.6092 3.98661 14.3571 130
cluster_4.pdb ( medoid) 30.6531 7.92741 36.2376 243
cluster_5.pdb ( medoid) 28.5531 2.55664 12.4246 73
cluster_6.pdb ( medoid) 20.6825 2.36916 7.01218 49
cluster_7.pdb ( medoid) 11.5696 6.56897 32.9692 76
cluster_8.pdb ( medoid) 10.6007 6.509 24.7516 69
cluster_9.pdb ( medoid) 5.45093 10.2735 35.7489 56
cluster_10.pdb ( medoid) 2.56676 9.73992 20.3011 25
Laboratory of Theory of Biopolymers 2015