CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Jan-11 07:54:50 UTC
Project NameKAVI-4CXL
SequenceGIVEQCCTSI CSLYQLENYC N
Secondary structure

CHHHHHCCCC CCHHHHHCCC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Jan-11 11:16 UTC
Project NameKAVI-4CXL
Clustering data
Cluster #123456789101112
Cluster density310.7303.6291.8145.9144.1137.8116.199.882.079.457.640.3
Cluster size33128827817217419512911398908547
Average cluster RMSD1.10.91.01.21.21.41.11.11.21.11.51.2

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.49 3.22 3.14 2.33 2.95 2.82 3.62 2.17 2.96 3.53 3.00 3.73
GDT_TS 0.74 0.67 0.65 0.76 0.67 0.71 0.62 0.82 0.70 0.64 0.73 0.69

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.35 1.53 1.25 1.43 1.76 2.13 1.00 1.82 2.34 1.55 2.59
2 1.35 0.00 0.83 1.87 1.22 2.08 1.53 1.83 2.42 1.92 1.78 2.50
3 1.53 0.83 0.00 2.04 1.06 2.39 1.20 2.03 2.85 1.79 1.91 2.66
4 1.25 1.87 2.04 0.00 1.78 1.40 2.54 1.17 1.78 2.38 1.74 2.13
5 1.43 1.22 1.06 1.78 0.00 2.54 1.13 1.79 2.89 1.29 1.85 2.15
6 1.76 2.08 2.39 1.40 2.54 0.00 3.15 1.75 1.30 3.17 2.10 2.99
7 2.13 1.53 1.20 2.54 1.13 3.15 0.00 2.58 3.56 1.24 2.34 2.47
8 1.00 1.83 2.03 1.17 1.79 1.75 2.58 0.00 1.90 2.52 1.73 2.72
9 1.82 2.42 2.85 1.78 2.89 1.30 3.56 1.90 0.00 3.46 2.31 3.06
10 2.34 1.92 1.79 2.38 1.29 3.17 1.24 2.52 3.46 0.00 2.41 1.70
11 1.55 1.78 1.91 1.74 1.85 2.10 2.34 1.73 2.31 2.41 0.00 2.44
12 2.59 2.50 2.66 2.13 2.15 2.99 2.47 2.72 3.06 1.70 2.44 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.86 0.84 0.88 0.87 0.81 0.80 0.90 0.82 0.76 0.88 0.75
2 0.86 1.00 0.95 0.81 0.88 0.81 0.86 0.80 0.74 0.83 0.86 0.76
3 0.84 0.95 1.00 0.81 0.92 0.75 0.90 0.80 0.73 0.83 0.81 0.74
4 0.88 0.81 0.81 1.00 0.81 0.87 0.76 0.92 0.83 0.77 0.92 0.80
5 0.87 0.88 0.92 0.81 1.00 0.76 0.89 0.82 0.75 0.87 0.83 0.80
6 0.81 0.81 0.75 0.87 0.76 1.00 0.74 0.83 0.86 0.71 0.82 0.73
7 0.80 0.86 0.90 0.76 0.89 0.74 1.00 0.76 0.69 0.90 0.76 0.77
8 0.90 0.80 0.80 0.92 0.82 0.83 0.76 1.00 0.80 0.76 0.90 0.74
9 0.82 0.74 0.73 0.83 0.75 0.86 0.69 0.80 1.00 0.70 0.81 0.73
10 0.76 0.83 0.83 0.77 0.87 0.71 0.90 0.76 0.70 1.00 0.77 0.86
11 0.88 0.86 0.81 0.92 0.83 0.82 0.76 0.90 0.81 0.77 1.00 0.76
12 0.75 0.76 0.74 0.80 0.80 0.73 0.77 0.74 0.73 0.86 0.76 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013