Download models Download Cα trajectory
Status: Done started: 2017-Sep-13 21:17:09 UTC
Project Name389_1
SequenceMMGTGMGGEN QSNEYKKGLW TVEEDRILMD YVKVHGKGQW NRIAKKTGLR RCGKSCRLRW MNYLSPDVKR GDFTEEEEDL IIRLHNLLGN RWSLIAGRVP GRTDNQVKNY WNTHLSKKLG IKKQKSKVSA SCSSSSLKEA KKESTTMSSI PNEKDPPRLM ASSSNVGSKS SPDVDHIDDW PSSGVECIAA QDFSTIEGSY TSSFWPMWEL LMNHDEMPSS FGDTDFLALN SLDMMDDLLL GHPYMLDHVS DSFDQEDFTG SSDE
Secondary structure

CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHCCCCCC HHHHHHHCCC CCHHHHHHHH HHHCCCCCCC CCCCHHHHHH HHHHHHHHCC CCHHHHHHCC CCCHHHHHHH HHCCCCCCCC CCCCCCCHHH HCCCCHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCHH HHHHHHHHHH HHHHHHCCCC CCCCCCCCHH HHCCCCCCCC CCHHHHHHHH HHHHHHCCCC CCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 02:10 UTC
Project Name389_1
Cluster #123456789101112
Cluster density137.5112.494.091.890.088.485.985.582.468.559.651.6
Cluster size24722218620016216515914816813511692
Average cluster RMSD1.82.02.02.21.81.91.91.72.02.01.91.8

Read about clustering method.

#123456789101112
RMSD 9.17 9.75 9.39 8.80 10.40 10.60 7.14 8.56 7.34 7.99 7.84 10.70
GDT_TS 0.37 0.37 0.35 0.37 0.40 0.35 0.40 0.36 0.38 0.39 0.39 0.34

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.24 4.25 4.26 4.40 4.77 7.07 4.31 6.04 5.04 7.08 4.40
2 4.24 0.00 3.22 4.54 3.34 3.54 6.61 3.64 5.37 5.60 6.50 4.09
3 4.25 3.22 0.00 4.36 3.54 3.22 6.26 3.40 5.03 5.34 5.98 3.24
4 4.26 4.54 4.36 0.00 4.49 5.01 6.15 4.24 5.14 3.99 6.08 5.28
5 4.40 3.34 3.54 4.49 0.00 2.82 7.33 4.21 6.11 5.72 6.89 3.55
6 4.77 3.54 3.22 5.01 2.82 0.00 7.10 4.09 5.98 5.79 6.67 3.28
7 7.07 6.61 6.26 6.15 7.33 7.10 0.00 5.73 3.76 5.68 3.25 7.23
8 4.31 3.64 3.40 4.24 4.21 4.09 5.73 0.00 4.44 4.93 5.68 4.41
9 6.04 5.37 5.03 5.14 6.11 5.98 3.76 4.44 0.00 4.61 4.17 6.33
10 5.04 5.60 5.34 3.99 5.72 5.79 5.68 4.93 4.61 0.00 5.78 6.14
11 7.08 6.50 5.98 6.08 6.89 6.67 3.25 5.68 4.17 5.78 0.00 6.70
12 4.40 4.09 3.24 5.28 3.55 3.28 7.23 4.41 6.33 6.14 6.70 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.52 0.53 0.49 0.51 0.48 0.38 0.52 0.41 0.45 0.37 0.51
2 0.52 1.00 0.63 0.52 0.60 0.61 0.40 0.57 0.47 0.49 0.40 0.58
3 0.53 0.63 1.00 0.54 0.57 0.60 0.40 0.56 0.47 0.45 0.38 0.59
4 0.49 0.52 0.54 1.00 0.50 0.48 0.43 0.51 0.47 0.54 0.47 0.44
5 0.51 0.60 0.57 0.50 1.00 0.62 0.38 0.54 0.44 0.47 0.38 0.56
6 0.48 0.61 0.60 0.48 0.62 1.00 0.37 0.52 0.44 0.46 0.39 0.57
7 0.38 0.40 0.40 0.43 0.38 0.37 1.00 0.42 0.56 0.47 0.61 0.39
8 0.52 0.57 0.56 0.51 0.54 0.52 0.42 1.00 0.51 0.47 0.40 0.48
9 0.41 0.47 0.47 0.47 0.44 0.44 0.56 0.51 1.00 0.55 0.50 0.43
10 0.45 0.49 0.45 0.54 0.47 0.46 0.47 0.47 0.55 1.00 0.45 0.46
11 0.37 0.40 0.38 0.47 0.38 0.39 0.61 0.40 0.50 0.45 1.00 0.40
12 0.51 0.58 0.59 0.44 0.56 0.57 0.39 0.48 0.43 0.46 0.40 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013