Download models Download Cα trajectory
Status: Done started: 2017-Sep-13 21:15:12 UTC
Project Name516_4
SequenceMGRKPCCKEG LNRGAWTAQE DKILVNYIKT HGEGKWRSLP KRAGLKRCGK SCRLRWLNYL RPGIKRGNIS PDEEELIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNTT LSKKLQGQSS QPPPNMSNAE AKSKTADPGS SSPHVVVRTK AIRCSPDQAL LVAPSATSPP QSNLDTSAAD SVQEDVSCDF LMLLDFDIDE FQDDDSSSSS VNSSDDLLML DEANTEFWME SDSFQCDILG GAKLCGRSEG LEFDLTSSFL EALWWESEEH
Secondary structure

CCHHHHHHCC CCCCCCHHHH HHHHHHHHHH CCCCCCCHHH HHHCCCCCHH HHHHHHHHHC CCCCCCCCCC HHHHHHHHHH HHHHCCCCHH HHHHCCCCCH HHHHHHHHCC HHHHCCCCCC CCCCCHHHHC CCCCCHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HHHCCCCCCC CCCHHHHHHC CCCCCCCCCE EECCCCCCCC CCEEECCCCC CCCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 02:09 UTC
Project Name516_4
Cluster #123456789101112
Cluster density133.398.996.285.184.584.482.180.677.872.661.754.7
Cluster size256220182174151158191153145127110133
Average cluster RMSD1.92.21.92.01.81.92.31.91.91.71.82.4

Read about clustering method.

#123456789101112
RMSD 10.70 11.30 11.80 11.80 10.30 13.10 8.41 12.60 8.95 11.20 11.00 11.60
GDT_TS 0.36 0.33 0.32 0.30 0.36 0.27 0.37 0.29 0.38 0.35 0.33 0.33

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 5.34 3.71 5.40 3.22 6.30 5.93 6.28 5.08 4.72 3.62 5.20
2 5.34 0.00 4.88 4.45 5.69 6.06 6.99 5.30 6.95 5.24 5.23 4.01
3 3.71 4.88 0.00 5.10 4.78 5.87 7.37 6.08 6.71 3.92 2.97 4.48
4 5.40 4.45 5.10 0.00 5.48 4.11 7.54 3.44 7.05 5.75 5.48 4.14
5 3.22 5.69 4.78 5.48 0.00 6.59 4.57 6.54 4.12 5.23 4.39 5.36
6 6.30 6.06 5.87 4.11 6.59 0.00 8.89 3.64 7.98 6.66 6.25 5.66
7 5.93 6.99 7.37 7.54 4.57 8.89 0.00 8.55 3.30 7.12 6.60 7.39
8 6.28 5.30 6.08 3.44 6.54 3.64 8.55 0.00 7.78 7.16 6.61 5.32
9 5.08 6.95 6.71 7.05 4.12 7.98 3.30 7.78 0.00 6.79 6.11 7.00
10 4.72 5.24 3.92 5.75 5.23 6.66 7.12 7.16 6.79 0.00 3.67 4.37
11 3.62 5.23 2.97 5.48 4.39 6.25 6.60 6.61 6.11 3.67 0.00 4.45
12 5.20 4.01 4.48 4.14 5.36 5.66 7.39 5.32 7.00 4.37 4.45 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.42 0.55 0.41 0.64 0.38 0.51 0.37 0.57 0.53 0.58 0.44
2 0.42 1.00 0.46 0.50 0.41 0.40 0.44 0.48 0.42 0.45 0.44 0.56
3 0.55 0.46 1.00 0.44 0.56 0.39 0.47 0.37 0.50 0.54 0.60 0.50
4 0.41 0.50 0.44 1.00 0.42 0.52 0.39 0.58 0.39 0.43 0.41 0.50
5 0.64 0.41 0.56 0.42 1.00 0.37 0.53 0.36 0.56 0.49 0.54 0.47
6 0.38 0.40 0.39 0.52 0.37 1.00 0.34 0.55 0.34 0.35 0.36 0.41
7 0.51 0.44 0.47 0.39 0.53 0.34 1.00 0.35 0.59 0.45 0.48 0.43
8 0.37 0.48 0.37 0.58 0.36 0.55 0.35 1.00 0.36 0.34 0.37 0.44
9 0.57 0.42 0.50 0.39 0.56 0.34 0.59 0.36 1.00 0.51 0.53 0.43
10 0.53 0.45 0.54 0.43 0.49 0.35 0.45 0.34 0.51 1.00 0.54 0.50
11 0.58 0.44 0.60 0.41 0.54 0.36 0.48 0.37 0.53 0.54 1.00 0.50
12 0.44 0.56 0.50 0.50 0.47 0.41 0.43 0.44 0.43 0.50 0.50 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013