Download models Download Cα trajectory
Status: Done started: 2018-Mar-18 16:45:08 UTC
Project Nameswer
SequenceGEIYNKDGNK LDLYGKAVGR HVWTTTGDSK NADQTYAQIG FKGETQINTD LTGFGQWEYR TKADRAEGEQ QNSNLVRLAF AGLKYAEVGS IDYGRNYGIV YDVESYTDGA PYFSGETWGG AYTDNYGTSR AGGLLTYRNS DFFGLVDGLS FGIQYQGKNQ DNHSINSQNG DGVGYTGAYE FDGFGVTAAY SNSKRTNDQQ DRDGNGDRAE SRAVGAKYDA NNVYLAAVYA ETRNGSIVEN TVTDTVEGAN KTQNLEVVAQ YQFDFGLRPA ISYVQSKGKQ LNGAGGSADL AKYIQAGATY YFNKNGNVWV DYRFNLLDEN DYSSSYVGTD DQAAVGITYQ F
Secondary structure

CCCCCCCCEE EEEEEEEEEE EEEECCCCCE EEEEEEEEEE EEEEEEEECC EEEEEEEEEE EECCCCCCCC CCCEEEEEEE EEEEECCCEE EEEEEEECCH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCE EEEEEEEEEC CCCCCCCCEE EEEEEECCCC CCCCCCCCCC CEEEEEEEEE ECCEEEEEEE EEEECCCCCC CCCCCCCEEE EEEEEEEEEE CCEEEEEEEE EEEEEEEEEE CCCCEEEEEE EEEEEEEEEE ECCCCCEEEE EEEEEEEEEC CCCCCCEEEE EEEEEEEEEE EEECCEEEEE EEEEECCCCC CCCCCCCCCC CEEEEEEEEE C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Mar-18 20:49 UTC
Project Nameswer
Cluster #123456789101112
Cluster density210.8190.7188.1137.4110.2105.1102.7100.097.193.279.168.3
Cluster size30324825819814714613113311911911385
Average cluster RMSD1.41.31.41.41.31.41.31.31.21.31.41.2

Read about clustering method.

#123456789101112
RMSD 3.30 3.29 3.28 3.14 3.44 3.17 3.29 3.10 3.69 3.45 3.43 3.27
GDT_TS 0.60 0.61 0.59 0.65 0.59 0.64 0.62 0.64 0.58 0.59 0.60 0.62

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 2.28 2.60 2.55 2.10 2.38 2.16 2.68 2.69 2.04 2.37 2.23
2 2.28 0.00 1.98 2.55 2.21 2.30 2.35 2.49 2.24 2.37 2.02 2.26
3 2.60 1.98 0.00 2.66 2.42 2.57 2.43 2.62 1.95 2.80 2.30 2.46
4 2.55 2.55 2.66 0.00 2.58 2.40 2.25 2.47 2.79 2.56 2.58 2.77
5 2.10 2.21 2.42 2.58 0.00 2.18 2.16 2.47 2.44 2.28 1.83 2.21
6 2.38 2.30 2.57 2.40 2.18 0.00 2.21 1.80 2.63 2.40 2.16 2.09
7 2.16 2.35 2.43 2.25 2.16 2.21 0.00 2.45 2.69 2.37 2.12 2.26
8 2.68 2.49 2.62 2.47 2.47 1.80 2.45 0.00 2.76 2.48 2.50 2.24
9 2.69 2.24 1.95 2.79 2.44 2.63 2.69 2.76 0.00 2.81 2.47 2.77
10 2.04 2.37 2.80 2.56 2.28 2.40 2.37 2.48 2.81 0.00 2.39 2.09
11 2.37 2.02 2.30 2.58 1.83 2.16 2.12 2.50 2.47 2.39 0.00 2.20
12 2.23 2.26 2.46 2.77 2.21 2.09 2.26 2.24 2.77 2.09 2.20 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.77 0.69 0.70 0.77 0.74 0.77 0.70 0.69 0.78 0.75 0.76
2 0.77 1.00 0.78 0.70 0.74 0.73 0.74 0.72 0.75 0.76 0.75 0.75
3 0.69 0.78 1.00 0.67 0.69 0.69 0.69 0.71 0.79 0.70 0.71 0.71
4 0.70 0.70 0.67 1.00 0.70 0.72 0.73 0.69 0.65 0.69 0.70 0.70
5 0.77 0.74 0.69 0.70 1.00 0.74 0.76 0.72 0.70 0.77 0.80 0.78
6 0.74 0.73 0.69 0.72 0.74 1.00 0.76 0.79 0.68 0.76 0.76 0.77
7 0.77 0.74 0.69 0.73 0.76 0.76 1.00 0.72 0.68 0.75 0.76 0.77
8 0.70 0.72 0.71 0.69 0.72 0.79 0.72 1.00 0.69 0.73 0.72 0.74
9 0.69 0.75 0.79 0.65 0.70 0.68 0.68 0.69 1.00 0.69 0.69 0.68
10 0.78 0.76 0.70 0.69 0.77 0.76 0.75 0.73 0.69 1.00 0.75 0.78
11 0.75 0.75 0.71 0.70 0.80 0.76 0.76 0.72 0.69 0.75 1.00 0.79
12 0.76 0.75 0.71 0.70 0.78 0.77 0.77 0.74 0.68 0.78 0.79 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013