Project Name | phosphotase |
Project Name | phosphotase |
Cluster # | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
Cluster density | 202.0 | 125.0 | 92.9 | 82.7 | 79.2 | 73.7 | 70.2 | 64.9 | 54.9 | 47.0 | 46.8 | 39.0 |
Cluster size | 378 | 214 | 222 | 156 | 158 | 178 | 182 | 174 | 91 | 111 | 78 | 58 |
Average cluster RMSD | 1.9 | 1.7 | 2.4 | 1.9 | 2.0 | 2.4 | 2.6 | 2.7 | 1.7 | 2.4 | 1.7 | 1.5 |
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
RMSD | 4.94 | 6.63 | 5.64 | 5.97 | 6.34 | 6.51 | 5.58 | 6.18 | 8.26 | 9.17 | 7.41 | 5.51 |
GDT_TS | 0.62 | 0.59 | 0.62 | 0.62 | 0.61 | 0.59 | 0.60 | 0.61 | 0.60 | 0.57 | 0.60 | 0.63 |
The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
1 | 0.00 | 6.16 | 3.44 | 3.94 | 4.90 | 4.88 | 4.84 | 5.01 | 6.87 | 8.14 | 5.94 | 5.65 |
2 | 6.16 | 0.00 | 5.29 | 4.89 | 3.88 | 4.42 | 4.41 | 4.48 | 4.76 | 5.23 | 4.54 | 3.83 |
3 | 3.44 | 5.29 | 0.00 | 2.60 | 3.96 | 4.72 | 3.37 | 4.53 | 6.55 | 7.89 | 4.68 | 4.32 |
4 | 3.94 | 4.89 | 2.60 | 0.00 | 3.77 | 3.71 | 3.96 | 4.40 | 6.21 | 7.45 | 4.34 | 4.14 |
5 | 4.90 | 3.88 | 3.96 | 3.77 | 0.00 | 4.52 | 3.57 | 3.90 | 5.10 | 6.06 | 3.82 | 4.03 |
6 | 4.88 | 4.42 | 4.72 | 3.71 | 4.52 | 0.00 | 5.60 | 4.81 | 4.61 | 5.99 | 5.36 | 5.14 |
7 | 4.84 | 4.41 | 3.37 | 3.96 | 3.57 | 5.60 | 0.00 | 4.45 | 6.85 | 7.67 | 4.72 | 2.81 |
8 | 5.01 | 4.48 | 4.53 | 4.40 | 3.90 | 4.81 | 4.45 | 0.00 | 5.09 | 5.48 | 3.47 | 5.18 |
9 | 6.87 | 4.76 | 6.55 | 6.21 | 5.10 | 4.61 | 6.85 | 5.09 | 0.00 | 3.03 | 5.60 | 7.06 |
10 | 8.14 | 5.23 | 7.89 | 7.45 | 6.06 | 5.99 | 7.67 | 5.48 | 3.03 | 0.00 | 6.16 | 7.90 |
11 | 5.94 | 4.54 | 4.68 | 4.34 | 3.82 | 5.36 | 4.72 | 3.47 | 5.60 | 6.16 | 0.00 | 5.15 |
12 | 5.65 | 3.83 | 4.32 | 4.14 | 4.03 | 5.14 | 2.81 | 5.18 | 7.06 | 7.90 | 5.15 | 0.00 |
The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
1 | 1.00 | 0.63 | 0.68 | 0.71 | 0.68 | 0.70 | 0.66 | 0.66 | 0.67 | 0.64 | 0.60 | 0.66 |
2 | 0.63 | 1.00 | 0.67 | 0.65 | 0.69 | 0.66 | 0.68 | 0.62 | 0.66 | 0.63 | 0.61 | 0.64 |
3 | 0.68 | 0.67 | 1.00 | 0.74 | 0.70 | 0.70 | 0.72 | 0.62 | 0.68 | 0.60 | 0.61 | 0.70 |
4 | 0.71 | 0.65 | 0.74 | 1.00 | 0.70 | 0.72 | 0.69 | 0.64 | 0.66 | 0.66 | 0.65 | 0.69 |
5 | 0.68 | 0.69 | 0.70 | 0.70 | 1.00 | 0.69 | 0.70 | 0.63 | 0.72 | 0.66 | 0.65 | 0.69 |
6 | 0.70 | 0.66 | 0.70 | 0.72 | 0.69 | 1.00 | 0.65 | 0.63 | 0.66 | 0.63 | 0.60 | 0.66 |
7 | 0.66 | 0.68 | 0.72 | 0.69 | 0.70 | 0.65 | 1.00 | 0.62 | 0.66 | 0.63 | 0.61 | 0.75 |
8 | 0.66 | 0.62 | 0.62 | 0.64 | 0.63 | 0.63 | 0.62 | 1.00 | 0.62 | 0.62 | 0.70 | 0.62 |
9 | 0.67 | 0.66 | 0.68 | 0.66 | 0.72 | 0.66 | 0.66 | 0.62 | 1.00 | 0.77 | 0.62 | 0.64 |
10 | 0.64 | 0.63 | 0.60 | 0.66 | 0.66 | 0.63 | 0.63 | 0.62 | 0.77 | 1.00 | 0.64 | 0.59 |
11 | 0.60 | 0.61 | 0.61 | 0.65 | 0.65 | 0.60 | 0.61 | 0.70 | 0.62 | 0.64 | 1.00 | 0.62 |
12 | 0.66 | 0.64 | 0.70 | 0.69 | 0.69 | 0.66 | 0.75 | 0.62 | 0.64 | 0.59 | 0.62 | 1.00 |
The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.
© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013