Download models Download Cα trajectory
Status: Done started: 2018-Sep-24 04:20:15 UTC
Project Name
SequenceDAYAQWLKDG GPSSGRPPPS
Secondary structure

CHHHHHHHHC CCCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Sep-24 08:41 UTC
Project Name
Cluster #123456789101112
Cluster density199.5177.7136.8131.7125.9125.7120.8116.5103.395.082.337.5
Cluster size28222819716816716214617115915711053
Average cluster RMSD1.41.31.41.31.31.31.21.51.51.71.31.4

Read about clustering method.

#123456789101112
RMSD 2.53 2.64 1.14 1.49 1.07 1.49 1.15 1.72 0.94 1.48 2.63 1.53
GDT_TS 0.76 0.76 0.94 0.88 0.93 0.89 0.93 0.86 0.94 0.89 0.71 0.90

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 1.26 2.40 2.85 2.77 2.52 2.62 2.86 2.74 2.65 1.57 3.12
2 1.26 0.00 2.36 2.69 2.82 2.43 2.56 2.81 2.66 2.56 1.33 3.00
3 2.40 2.36 0.00 1.36 1.12 1.38 1.09 1.39 1.13 0.83 2.19 1.55
4 2.85 2.69 1.36 0.00 1.19 1.41 1.24 1.65 1.16 1.30 2.90 1.46
5 2.77 2.82 1.12 1.19 0.00 1.57 1.30 1.90 1.05 1.28 2.84 1.38
6 2.52 2.43 1.38 1.41 1.57 0.00 1.15 1.45 1.59 1.57 2.46 1.84
7 2.62 2.56 1.09 1.24 1.30 1.15 0.00 1.15 1.15 1.44 2.62 1.51
8 2.86 2.81 1.39 1.65 1.90 1.45 1.15 0.00 1.56 1.45 2.72 1.83
9 2.74 2.66 1.13 1.16 1.05 1.59 1.15 1.56 0.00 1.17 2.74 1.44
10 2.65 2.56 0.83 1.30 1.28 1.57 1.44 1.45 1.17 0.00 2.40 1.72
11 1.57 1.33 2.19 2.90 2.84 2.46 2.62 2.72 2.74 2.40 0.00 3.13
12 3.12 3.00 1.55 1.46 1.38 1.84 1.51 1.83 1.44 1.72 3.13 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.90 0.78 0.71 0.72 0.75 0.72 0.70 0.74 0.78 0.86 0.68
2 0.90 1.00 0.79 0.75 0.76 0.76 0.75 0.71 0.75 0.78 0.90 0.70
3 0.78 0.79 1.00 0.86 0.91 0.91 0.93 0.88 0.90 0.96 0.78 0.89
4 0.71 0.75 0.86 1.00 0.91 0.86 0.88 0.85 0.91 0.90 0.72 0.86
5 0.72 0.76 0.91 0.91 1.00 0.82 0.89 0.82 0.93 0.90 0.71 0.89
6 0.75 0.76 0.91 0.86 0.82 1.00 0.90 0.86 0.85 0.85 0.75 0.82
7 0.72 0.75 0.93 0.88 0.89 0.90 1.00 0.91 0.90 0.86 0.72 0.90
8 0.70 0.71 0.88 0.85 0.82 0.86 0.91 1.00 0.85 0.85 0.72 0.86
9 0.74 0.75 0.90 0.91 0.93 0.85 0.90 0.85 1.00 0.94 0.72 0.91
10 0.78 0.78 0.96 0.90 0.90 0.85 0.86 0.85 0.94 1.00 0.76 0.85
11 0.86 0.90 0.78 0.72 0.71 0.75 0.72 0.72 0.72 0.76 1.00 0.69
12 0.68 0.70 0.89 0.86 0.89 0.82 0.90 0.86 0.91 0.85 0.69 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013