Download models Download Cα trajectory
Status: Done started: 2017-Sep-13 21:15:22 UTC
Project Name516_1
SequenceMGRKPCCKEG LNRGAWTAEE DKILVNYIKT HGEGKWRSLP QRAGLNRCGK SCRLRWLNYL RPGIKRGNIS PDEEELIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNTN LSKKAQGGSP SLKSKMKNLS TASKAAKTPA LPTAGVIQTK AVRCIQDVLD SPKSAPSSDS NDSPSSPANS PQQSDKEDDP VFLDDGDSGD FQDDDSSSSD VNSSDELGFS SELSIDFFMQ SNLDQPFFME GEMVSILDPA GEFNFNKSFL NAEWWLPDNE
Secondary structure

CCCCCCCCCC CCCHHHHHHH HHHHHHHHHH CCCCCCCHHH HHHCCCCCCC HHHHHHHHCC CCCCCCCCCC HHHHHHHHHH HHHHCCCCHH HHHHCCCCCC CHHHHHHHCC CCCCCCCCCC CCCHHHHCCC CHHHHHHHHH HHHHHHHHHH HHHHHHHHCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCHHHHH HHHHHHHHHH HHHCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CHHHHHHHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 02:09 UTC
Project Name516_1
Cluster #123456789101112
Cluster density105.688.588.381.175.765.664.543.640.832.125.824.5
Cluster size27526728219317117120913092817356
Average cluster RMSD2.63.03.22.42.32.63.23.02.32.52.82.3

Read about clustering method.

#123456789101112
RMSD 10.90 11.10 10.50 9.73 9.51 9.94 10.00 9.76 9.85 9.27 9.45 9.80
GDT_TS 0.38 0.31 0.30 0.41 0.37 0.39 0.37 0.36 0.37 0.41 0.38 0.41

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 8.41 7.75 8.52 5.70 10.30 8.87 4.86 5.49 8.55 9.62 10.30
2 8.41 0.00 4.26 5.35 4.90 6.03 5.30 8.01 8.20 6.02 6.23 7.60
3 7.75 4.26 0.00 5.60 5.68 7.24 5.39 7.76 7.70 6.34 6.59 7.69
4 8.52 5.35 5.60 0.00 5.50 5.23 3.98 7.86 7.79 3.99 4.65 5.36
5 5.70 4.90 5.68 5.50 0.00 6.04 5.75 5.71 5.99 5.81 6.44 7.49
6 10.30 6.03 7.24 5.23 6.04 0.00 5.66 9.23 8.86 5.32 4.40 5.22
7 8.87 5.30 5.39 3.98 5.75 5.66 0.00 8.59 7.88 5.53 5.46 6.21
8 4.86 8.01 7.76 7.86 5.71 9.23 8.59 0.00 5.46 7.62 8.66 9.33
9 5.49 8.20 7.70 7.79 5.99 8.86 7.88 5.46 0.00 7.99 8.42 8.22
10 8.55 6.02 6.34 3.99 5.81 5.32 5.53 7.62 7.99 0.00 3.47 4.36
11 9.62 6.23 6.59 4.65 6.44 4.40 5.46 8.66 8.42 3.47 0.00 3.24
12 10.30 7.60 7.69 5.36 7.49 5.22 6.21 9.33 8.22 4.36 3.24 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.35 0.37 0.44 0.49 0.44 0.35 0.50 0.54 0.45 0.41 0.45
2 0.35 1.00 0.54 0.43 0.46 0.41 0.45 0.40 0.39 0.42 0.42 0.40
3 0.37 0.54 1.00 0.43 0.42 0.43 0.46 0.40 0.40 0.45 0.45 0.45
4 0.44 0.43 0.43 1.00 0.50 0.53 0.56 0.47 0.44 0.59 0.53 0.53
5 0.49 0.46 0.42 0.50 1.00 0.56 0.45 0.49 0.47 0.50 0.49 0.49
6 0.44 0.41 0.43 0.53 0.56 1.00 0.47 0.46 0.45 0.53 0.55 0.53
7 0.35 0.45 0.46 0.56 0.45 0.47 1.00 0.41 0.40 0.48 0.47 0.47
8 0.50 0.40 0.40 0.47 0.49 0.46 0.41 1.00 0.56 0.43 0.43 0.44
9 0.54 0.39 0.40 0.44 0.47 0.45 0.40 0.56 1.00 0.45 0.44 0.45
10 0.45 0.42 0.45 0.59 0.50 0.53 0.48 0.43 0.45 1.00 0.64 0.65
11 0.41 0.42 0.45 0.53 0.49 0.55 0.47 0.43 0.44 0.64 1.00 0.69
12 0.45 0.40 0.45 0.53 0.49 0.53 0.47 0.44 0.45 0.65 0.69 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013