Project Name | Geo71_11LNRFM5 |
Project Name | Geo71_11LNRFM5 |
Cluster # | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
Cluster density | 209.4 | 196.1 | 160.4 | 139.7 | 139.1 | 130.1 | 126.9 | 123.3 | 122.4 | 93.1 | 70.5 | 42.4 |
Cluster size | 285 | 276 | 209 | 172 | 178 | 158 | 160 | 157 | 152 | 116 | 86 | 51 |
Average cluster RMSD | 1.4 | 1.4 | 1.3 | 1.2 | 1.3 | 1.2 | 1.3 | 1.3 | 1.2 | 1.2 | 1.2 | 1.2 |
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
RMSD | 3.21 | 3.22 | 3.14 | 3.27 | 3.44 | 2.80 | 3.11 | 3.24 | 4.06 | 4.24 | 2.89 | 2.81 |
GDT_TS | 0.63 | 0.62 | 0.65 | 0.63 | 0.60 | 0.66 | 0.60 | 0.63 | 0.59 | 0.54 | 0.65 | 0.65 |
The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
1 | 0.00 | 2.20 | 2.48 | 2.29 | 2.36 | 2.21 | 3.01 | 2.37 | 3.49 | 3.37 | 2.20 | 2.99 |
2 | 2.20 | 0.00 | 2.33 | 2.28 | 2.54 | 2.24 | 2.54 | 2.38 | 3.37 | 3.46 | 2.23 | 2.87 |
3 | 2.48 | 2.33 | 0.00 | 2.61 | 2.29 | 2.15 | 2.39 | 2.72 | 3.23 | 3.24 | 2.14 | 2.47 |
4 | 2.29 | 2.28 | 2.61 | 0.00 | 2.83 | 2.34 | 2.79 | 2.04 | 3.79 | 3.67 | 2.44 | 3.05 |
5 | 2.36 | 2.54 | 2.29 | 2.83 | 0.00 | 2.44 | 2.67 | 2.74 | 3.15 | 2.56 | 2.30 | 2.62 |
6 | 2.21 | 2.24 | 2.15 | 2.34 | 2.44 | 0.00 | 2.39 | 2.53 | 3.35 | 3.30 | 1.85 | 2.47 |
7 | 3.01 | 2.54 | 2.39 | 2.79 | 2.67 | 2.39 | 0.00 | 2.85 | 3.24 | 3.20 | 2.53 | 2.87 |
8 | 2.37 | 2.38 | 2.72 | 2.04 | 2.74 | 2.53 | 2.85 | 0.00 | 3.88 | 3.55 | 2.60 | 3.15 |
9 | 3.49 | 3.37 | 3.23 | 3.79 | 3.15 | 3.35 | 3.24 | 3.88 | 0.00 | 3.51 | 3.31 | 3.56 |
10 | 3.37 | 3.46 | 3.24 | 3.67 | 2.56 | 3.30 | 3.20 | 3.55 | 3.51 | 0.00 | 3.04 | 3.58 |
11 | 2.20 | 2.23 | 2.14 | 2.44 | 2.30 | 1.85 | 2.53 | 2.60 | 3.31 | 3.04 | 0.00 | 2.35 |
12 | 2.99 | 2.87 | 2.47 | 3.05 | 2.62 | 2.47 | 2.87 | 3.15 | 3.56 | 3.58 | 2.35 | 0.00 |
The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
1 | 1.00 | 0.75 | 0.70 | 0.71 | 0.68 | 0.71 | 0.64 | 0.70 | 0.67 | 0.60 | 0.73 | 0.61 |
2 | 0.75 | 1.00 | 0.72 | 0.70 | 0.68 | 0.73 | 0.68 | 0.70 | 0.67 | 0.62 | 0.73 | 0.63 |
3 | 0.70 | 0.72 | 1.00 | 0.68 | 0.71 | 0.75 | 0.71 | 0.67 | 0.70 | 0.63 | 0.75 | 0.69 |
4 | 0.71 | 0.70 | 0.68 | 1.00 | 0.65 | 0.72 | 0.66 | 0.74 | 0.65 | 0.58 | 0.69 | 0.64 |
5 | 0.68 | 0.68 | 0.71 | 0.65 | 1.00 | 0.68 | 0.67 | 0.64 | 0.73 | 0.68 | 0.69 | 0.66 |
6 | 0.71 | 0.73 | 0.75 | 0.72 | 0.68 | 1.00 | 0.71 | 0.69 | 0.70 | 0.64 | 0.77 | 0.68 |
7 | 0.64 | 0.68 | 0.71 | 0.66 | 0.67 | 0.71 | 1.00 | 0.62 | 0.68 | 0.62 | 0.68 | 0.64 |
8 | 0.70 | 0.70 | 0.67 | 0.74 | 0.64 | 0.69 | 0.62 | 1.00 | 0.62 | 0.60 | 0.67 | 0.63 |
9 | 0.67 | 0.67 | 0.70 | 0.65 | 0.73 | 0.70 | 0.68 | 0.62 | 1.00 | 0.65 | 0.70 | 0.66 |
10 | 0.60 | 0.62 | 0.63 | 0.58 | 0.68 | 0.64 | 0.62 | 0.60 | 0.65 | 1.00 | 0.63 | 0.61 |
11 | 0.73 | 0.73 | 0.75 | 0.69 | 0.69 | 0.77 | 0.68 | 0.67 | 0.70 | 0.63 | 1.00 | 0.69 |
12 | 0.61 | 0.63 | 0.69 | 0.64 | 0.66 | 0.68 | 0.64 | 0.63 | 0.66 | 0.61 | 0.69 | 1.00 |
The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.
© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013