Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 13:25:00 UTC
Project Name516_2
SequenceMGRKPCCKEG LNRGAWTAQE DKILVNYIKT HGEGKWRSLP KRAGLKRCGK SCRLRWLNYL RPGIKRGNIS PDEEELIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNTT LSKKLQGNSG QPPHRMSNAT ARSKSATYNS AGDHPVVRTK AQRCHPDSAL LVAPKMTSFP GRNSDASASA GRQDDSSLDF LMLLDIDITE FQDDDSSSSN VNSSDDLLLL DEWDTGFWME SDIFQCDPLG GAVLCERAEM LEFDLKSSFL DAHWWTCEED
Secondary structure

CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH CCCCCCCHHH HHCCCCCCHH HHHHHHHHCC CCCCCCCCCC HHHHHHHHHH HHHHCCCCHH HHHHCCCCCH HHHHHHHHCC CCCCCCCCCC CCCCCHHHHC CCCHHHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 18:19 UTC
Project Name516_2
Cluster #123456789101112
Cluster density127.5118.0102.897.788.784.677.457.555.250.149.040.2
Cluster size285240210211198198149125108919491
Average cluster RMSD2.22.02.02.22.22.31.92.22.01.81.92.3

Read about clustering method.

#123456789101112
RMSD 10.00 9.30 9.78 11.50 11.20 8.65 12.20 9.59 12.10 9.20 9.73 7.54
GDT_TS 0.41 0.39 0.39 0.35 0.31 0.39 0.30 0.38 0.29 0.40 0.38 0.42

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 5.13 5.19 4.78 5.01 5.98 5.39 4.01 5.42 4.57 5.00 6.93
2 5.13 0.00 2.87 5.60 6.38 4.40 6.83 4.34 6.44 4.20 3.95 5.42
3 5.19 2.87 0.00 5.13 5.80 4.66 6.17 4.53 5.93 4.45 3.76 5.63
4 4.78 5.60 5.13 0.00 4.29 6.07 4.75 5.52 4.44 6.10 5.88 7.11
5 5.01 6.38 5.80 4.29 0.00 6.77 3.94 5.40 4.10 6.36 5.98 7.48
6 5.98 4.40 4.66 6.07 6.77 0.00 7.17 5.71 6.85 5.37 5.31 3.97
7 5.39 6.83 6.17 4.75 3.94 7.17 0.00 6.24 3.45 6.95 6.21 8.30
8 4.01 4.34 4.53 5.52 5.40 5.71 6.24 0.00 5.80 3.53 4.16 6.46
9 5.42 6.44 5.93 4.44 4.10 6.85 3.45 5.80 0.00 6.57 5.92 8.07
10 4.57 4.20 4.45 6.10 6.36 5.37 6.95 3.53 6.57 0.00 3.32 5.96
11 5.00 3.95 3.76 5.88 5.98 5.31 6.21 4.16 5.92 3.32 0.00 6.20
12 6.93 5.42 5.63 7.11 7.48 3.97 8.30 6.46 8.07 5.96 6.20 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.43 0.44 0.52 0.48 0.39 0.44 0.52 0.43 0.49 0.45 0.37
2 0.43 1.00 0.65 0.41 0.35 0.51 0.34 0.49 0.37 0.51 0.51 0.45
3 0.44 0.65 1.00 0.44 0.39 0.51 0.37 0.48 0.39 0.54 0.55 0.46
4 0.52 0.41 0.44 1.00 0.52 0.40 0.48 0.40 0.48 0.43 0.45 0.39
5 0.48 0.35 0.39 0.52 1.00 0.35 0.52 0.41 0.50 0.37 0.38 0.35
6 0.39 0.51 0.51 0.40 0.35 1.00 0.35 0.39 0.37 0.42 0.45 0.53
7 0.44 0.34 0.37 0.48 0.52 0.35 1.00 0.36 0.56 0.36 0.38 0.33
8 0.52 0.49 0.48 0.40 0.41 0.39 0.36 1.00 0.39 0.57 0.49 0.38
9 0.43 0.37 0.39 0.48 0.50 0.37 0.56 0.39 1.00 0.38 0.41 0.36
10 0.49 0.51 0.54 0.43 0.37 0.42 0.36 0.57 0.38 1.00 0.59 0.40
11 0.45 0.51 0.55 0.45 0.38 0.45 0.38 0.49 0.41 0.59 1.00 0.40
12 0.37 0.45 0.46 0.39 0.35 0.53 0.33 0.38 0.36 0.40 0.40 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013