CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Mar-14 18:54:25 UTC
Project NameTau
SequenceKHQPGGGKVQ IINKKLDLSN VQSKCGSKDN IKHVPGGGSV QIVYKP
Secondary structure

CCCCCCCCCC CCHHHHCCCC CCCCCCCCCC CCCCCCCCCC CCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Mar-14 22:19 UTC
Project NameTau
Clustering data
Cluster #123456789101112
Cluster density199.2154.0137.3129.499.983.077.570.641.037.235.935.2
Cluster size312276251270165162143100113715978
Average cluster RMSD1.61.81.82.11.72.01.81.42.81.91.62.2

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 6.95 7.74 7.21 7.70 7.26 8.81 8.69 8.53 6.79 9.47 7.33 8.10
GDT_TS 0.41 0.38 0.39 0.38 0.40 0.39 0.38 0.33 0.45 0.30 0.43 0.32

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.80 3.27 2.46 3.22 4.95 3.86 5.87 4.15 6.50 4.34 6.46
2 1.80 0.00 3.58 2.71 3.30 5.22 3.89 5.91 5.16 6.39 5.08 6.71
3 3.27 3.58 0.00 2.81 2.86 5.10 3.86 6.56 4.88 6.82 4.26 7.10
4 2.46 2.71 2.81 0.00 2.81 4.58 3.56 6.22 4.25 6.54 3.61 6.46
5 3.22 3.30 2.86 2.81 0.00 6.07 5.02 6.21 5.02 6.90 4.56 6.18
6 4.95 5.22 5.10 4.58 6.07 0.00 2.47 4.20 5.41 4.31 5.06 5.43
7 3.86 3.89 3.86 3.56 5.02 2.47 0.00 4.91 5.21 4.51 4.79 6.38
8 5.87 5.91 6.56 6.22 6.21 4.20 4.91 0.00 7.03 3.56 6.99 3.26
9 4.15 5.16 4.88 4.25 5.02 5.41 5.21 7.03 0.00 7.53 2.98 7.15
10 6.50 6.39 6.82 6.54 6.90 4.31 4.51 3.56 7.53 0.00 7.19 5.13
11 4.34 5.08 4.26 3.61 4.56 5.06 4.79 6.99 2.98 7.19 0.00 6.92
12 6.46 6.71 7.10 6.46 6.18 5.43 6.38 3.26 7.15 5.13 6.92 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.79 0.63 0.68 0.66 0.55 0.59 0.55 0.59 0.51 0.53 0.51
2 0.79 1.00 0.65 0.66 0.65 0.52 0.61 0.56 0.54 0.49 0.52 0.51
3 0.63 0.65 1.00 0.66 0.68 0.61 0.68 0.53 0.54 0.45 0.56 0.48
4 0.68 0.66 0.66 1.00 0.69 0.65 0.64 0.51 0.57 0.46 0.61 0.52
5 0.66 0.65 0.68 0.69 1.00 0.54 0.54 0.55 0.55 0.48 0.56 0.49
6 0.55 0.52 0.61 0.65 0.54 1.00 0.68 0.61 0.52 0.53 0.56 0.55
7 0.59 0.61 0.68 0.64 0.54 0.68 1.00 0.54 0.55 0.54 0.53 0.46
8 0.55 0.56 0.53 0.51 0.55 0.61 0.54 1.00 0.50 0.60 0.49 0.64
9 0.59 0.54 0.54 0.57 0.55 0.52 0.55 0.50 1.00 0.49 0.63 0.46
10 0.51 0.49 0.45 0.46 0.48 0.53 0.54 0.60 0.49 1.00 0.46 0.49
11 0.53 0.52 0.56 0.61 0.56 0.56 0.53 0.49 0.63 0.46 1.00 0.47
12 0.51 0.51 0.48 0.52 0.49 0.55 0.46 0.64 0.46 0.49 0.47 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013