Download models Download Cα trajectory
Status: Done started: 2018-Feb-15 03:19:23 UTC
Project NameA_po
SequenceMEGISIYTSD NYTEEMGSGD YDSMKEPCFR EENANFNKIF LPTIYSIIFL TGIVGNGLVI LVMGYQKKLR SMTDKYRLHL SVADLLFVIT LPFWAVDAVA NWYFGNFLCK AVHVIYTVNL YSSVLILAFI SLDRYLAIVH ATNSQRPRKL LAEKVVYVGV WIPALLLTIP DFIFANVSEA DDRYICDRFY PNDLWVVVFQ FQHIMVGLIL PGIVILSCYC IIISKLSHSK GHQKRKALKT TVILILAFFA CWLPYYIGIS IDSFILLEII KQGCEFENTV HKWISITEAL AFFHCCLNPI LYAFLGAKFK TSAQHALTSV SRGSSLKILS KGKRGGHSSV STESESSSFH SS
Secondary structure

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCHHHHCH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CHHHHHHHHH HHHHHHHHHH CHHHHHHHHC CCCCCHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCHHHHH HHHCHHHHHH HHHHHHCCHH HHHHEEEEEE CCEEEEEECC CCHHHHHHHH HHHHHHHCHH HHHHHHHHHH HHHHCCCCCC CCHHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHCCC CCCHHHHHHH HHHHHHHHHH HCCHHHHHHH CCCCCCCCCC CHHHHHHHHH HCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Feb-15 07:24 UTC
Project NameA_po
Cluster #123456789101112
Cluster density170.4168.3141.2135.2130.6129.3115.992.688.779.163.060.3
Cluster size2652482141971981611631361381078786
Average cluster RMSD1.61.51.51.51.51.21.41.51.61.41.41.4

Read about clustering method.

#123456789101112
RMSD 4.91 5.12 4.98 4.30 4.50 5.13 5.29 4.97 3.60 3.70 5.01 5.30
GDT_TS 0.56 0.57 0.55 0.58 0.55 0.56 0.57 0.58 0.64 0.58 0.58 0.56

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 3.13 3.37 3.80 3.86 3.30 3.43 3.90 4.19 3.65 3.78 3.22
2 3.13 0.00 2.19 3.05 3.28 3.10 2.75 3.51 3.96 3.31 2.42 2.74
3 3.37 2.19 0.00 2.64 2.80 3.29 3.04 3.66 4.14 3.20 2.60 2.88
4 3.80 3.05 2.64 0.00 2.31 3.73 2.80 3.13 3.55 2.86 2.77 3.34
5 3.86 3.28 2.80 2.31 0.00 4.18 3.49 3.75 3.62 2.46 2.97 3.88
6 3.30 3.10 3.29 3.73 4.18 0.00 3.33 3.99 4.57 4.07 3.53 2.87
7 3.43 2.75 3.04 2.80 3.49 3.33 0.00 2.50 3.92 3.81 2.98 2.76
8 3.90 3.51 3.66 3.13 3.75 3.99 2.50 0.00 3.79 3.76 3.32 3.57
9 4.19 3.96 4.14 3.55 3.62 4.57 3.92 3.79 0.00 3.05 3.85 4.35
10 3.65 3.31 3.20 2.86 2.46 4.07 3.81 3.76 3.05 0.00 3.15 4.00
11 3.78 2.42 2.60 2.77 2.97 3.53 2.98 3.32 3.85 3.15 0.00 3.28
12 3.22 2.74 2.88 3.34 3.88 2.87 2.76 3.57 4.35 4.00 3.28 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.70 0.70 0.68 0.68 0.72 0.72 0.68 0.66 0.69 0.69 0.76
2 0.70 1.00 0.77 0.67 0.68 0.70 0.70 0.66 0.63 0.71 0.74 0.72
3 0.70 0.77 1.00 0.71 0.70 0.69 0.72 0.66 0.64 0.70 0.74 0.73
4 0.68 0.67 0.71 1.00 0.74 0.65 0.73 0.70 0.67 0.73 0.71 0.66
5 0.68 0.68 0.70 0.74 1.00 0.67 0.68 0.65 0.66 0.77 0.69 0.67
6 0.72 0.70 0.69 0.65 0.67 1.00 0.69 0.64 0.63 0.69 0.69 0.74
7 0.72 0.70 0.72 0.73 0.68 0.69 1.00 0.77 0.67 0.69 0.71 0.72
8 0.68 0.66 0.66 0.70 0.65 0.64 0.77 1.00 0.68 0.67 0.69 0.66
9 0.66 0.63 0.64 0.67 0.66 0.63 0.67 0.68 1.00 0.69 0.66 0.64
10 0.69 0.71 0.70 0.73 0.77 0.69 0.69 0.67 0.69 1.00 0.71 0.69
11 0.69 0.74 0.74 0.71 0.69 0.69 0.71 0.69 0.66 0.71 1.00 0.70
12 0.76 0.72 0.73 0.66 0.67 0.74 0.72 0.66 0.64 0.69 0.70 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013