Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 00:22:47 UTC
Project Name389_4
SequenceMMKGEMEGEN QNNEYKKGLW TVEEDKILMD YVKEHGKGKW NRIAKVTGLK RCGKSCRLRW MNYLSPNVKR GDFSEEEEDL IIRLHKLLGN RWSLIAGRVP GRTDNQVKNY WNTHLSKKLG IKKGNGKASA SSSQRTSPKS ESSTSTSPST SSSEGNSSSD HNGSETEPSV EPSSDTGSCL SGSLTELEST EDLEMETDDY ESSFWFDWEA LDNHQNYVIG EWYNSDLELN FPSLMEFLEL GHSYPLDFVW DGLLLELTYD LIML
Secondary structure

CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHCCCCCH HHHHHHHCCC CCHHHHHHHH HHHCCCCCCC CCCCHHHHHH HHHHHHHHCC CCHHHHHHCC CCCHHHHHHH HHCCCCCCCC CCCCCCCCCC CCCCCCHHHH HHHHHHHHHH HHHHHHHHHH HHHHCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHHHHHHH CCCCCCCCCC HHHHHHHHHH CCCCCCCCCC CCCCCCCCCC CCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 05:16 UTC
Project Name389_4
Cluster #123456789101112
Cluster density151.8116.6110.4105.8104.1102.381.780.955.453.548.044.9
Cluster size289225224209193208123139921109296
Average cluster RMSD1.91.92.02.01.92.01.51.71.72.11.92.1

Read about clustering method.

#123456789101112
RMSD 7.62 8.76 8.50 8.24 9.05 8.80 8.35 8.36 8.10 7.28 7.33 7.18
GDT_TS 0.38 0.34 0.37 0.34 0.34 0.34 0.36 0.37 0.36 0.37 0.39 0.41

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.57 3.44 4.89 4.60 3.83 4.35 3.93 3.63 5.08 4.36 4.93
2 4.57 0.00 5.06 3.07 2.91 4.87 3.81 3.59 4.11 6.39 5.19 6.05
3 3.44 5.06 0.00 5.30 4.72 4.20 4.89 4.37 4.49 6.30 5.64 5.88
4 4.89 3.07 5.30 0.00 3.80 5.64 4.82 4.62 4.97 6.80 5.63 6.45
5 4.60 2.91 4.72 3.80 0.00 4.91 3.21 3.10 3.98 6.73 5.61 6.44
6 3.83 4.87 4.20 5.64 4.91 0.00 5.03 4.56 4.68 5.75 5.09 5.81
7 4.35 3.81 4.89 4.82 3.21 5.03 0.00 2.66 3.16 5.83 4.73 5.68
8 3.93 3.59 4.37 4.62 3.10 4.56 2.66 0.00 2.97 5.88 4.76 5.58
9 3.63 4.11 4.49 4.97 3.98 4.68 3.16 2.97 0.00 5.25 4.51 5.17
10 5.08 6.39 6.30 6.80 6.73 5.75 5.83 5.88 5.25 0.00 3.84 3.38
11 4.36 5.19 5.64 5.63 5.61 5.09 4.73 4.76 4.51 3.84 0.00 4.27
12 4.93 6.05 5.88 6.45 6.44 5.81 5.68 5.58 5.17 3.38 4.27 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.46 0.58 0.48 0.45 0.52 0.50 0.53 0.53 0.44 0.51 0.46
2 0.46 1.00 0.44 0.62 0.62 0.46 0.54 0.54 0.52 0.43 0.44 0.44
3 0.58 0.44 1.00 0.42 0.45 0.52 0.46 0.48 0.47 0.41 0.47 0.42
4 0.48 0.62 0.42 1.00 0.54 0.43 0.48 0.49 0.47 0.41 0.44 0.41
5 0.45 0.62 0.45 0.54 1.00 0.43 0.61 0.59 0.53 0.43 0.44 0.42
6 0.52 0.46 0.52 0.43 0.43 1.00 0.45 0.48 0.47 0.47 0.48 0.41
7 0.50 0.54 0.46 0.48 0.61 0.45 1.00 0.66 0.61 0.43 0.48 0.43
8 0.53 0.54 0.48 0.49 0.59 0.48 0.66 1.00 0.63 0.45 0.50 0.45
9 0.53 0.52 0.47 0.47 0.53 0.47 0.61 0.63 1.00 0.45 0.47 0.44
10 0.44 0.43 0.41 0.41 0.43 0.47 0.43 0.45 0.45 1.00 0.57 0.57
11 0.51 0.44 0.47 0.44 0.44 0.48 0.48 0.50 0.47 0.57 1.00 0.51
12 0.46 0.44 0.42 0.41 0.42 0.41 0.43 0.45 0.44 0.57 0.51 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013