Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 13:24:59 UTC
Project Name389_2
SequenceMMKGMMEGEN QNNEYKKGLW TVEEDKILMD YVKEHGKGKW NRIAKRTGLK RCGKSCRLRW MNYLSPSVKR GDFSEEEEDL IIRLHKLLGN RWSLIAGRVP GRTDNQVKNY WNTHLSKKLG IKKKNGKASA SKSPRTSHKS TESFHTKTSN GSSEGNSSED KEMSDTNKEP NPSRDCSECS HGSLPELTSD EDLEMNTLTY QSSFWDDWEA LLNHQQLDAG EWFDSDLFLN TPGLMEFLSL GHSYFLDFVW DGDLLEYGLC LIML
Secondary structure

CCCCCCCCCC CCHHHHHCCC CHHHHHHHHH HHHHHCCCCC HHHHHHHCCC CHHHHHHHHH HHCCCCCCCC CCCCHHHHHH HHHHHHHHCC CCHHHHHHCC CCCHHHHHHH HHCCCCHHHH CCCCCCCCCC CCCCCCCCCC HHHHHHHHHH HHHHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCHHHHHH HHHHHHHHHH HHCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 18:18 UTC
Project Name389_2
Cluster #123456789101112
Cluster density137.3104.598.798.196.488.476.975.471.868.554.854.3
Cluster size266184197175192194129138149135120121
Average cluster RMSD1.91.82.01.82.02.21.71.82.12.02.22.2

Read about clustering method.

#123456789101112
RMSD 8.41 8.73 8.71 8.96 8.24 8.92 8.87 8.74 8.61 8.29 8.21 8.25
GDT_TS 0.42 0.39 0.40 0.33 0.38 0.35 0.37 0.37 0.41 0.43 0.40 0.39

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.15 5.28 5.71 5.02 4.44 3.86 5.00 4.64 4.25 6.28 6.89
2 4.15 0.00 4.93 6.54 4.55 5.78 4.82 4.55 4.17 3.12 5.43 6.24
3 5.28 4.93 0.00 6.16 3.98 5.01 5.13 4.60 4.56 4.69 5.50 6.16
4 5.71 6.54 6.16 0.00 5.78 5.41 4.73 7.20 5.51 6.64 6.90 7.84
5 5.02 4.55 3.98 5.78 0.00 6.04 5.07 3.52 3.78 3.80 3.88 5.27
6 4.44 5.78 5.01 5.41 6.04 0.00 3.79 6.27 5.72 6.07 7.36 7.35
7 3.86 4.82 5.13 4.73 5.07 3.79 0.00 5.39 4.07 4.82 6.26 6.95
8 5.00 4.55 4.60 7.20 3.52 6.27 5.39 0.00 4.52 4.10 4.21 5.23
9 4.64 4.17 4.56 5.51 3.78 5.72 4.07 4.52 0.00 3.99 4.58 5.68
10 4.25 3.12 4.69 6.64 3.80 6.07 4.82 4.10 3.99 0.00 4.97 6.24
11 6.28 5.43 5.50 6.90 3.88 7.36 6.26 4.21 4.58 4.97 0.00 4.13
12 6.89 6.24 6.16 7.84 5.27 7.35 6.95 5.23 5.68 6.24 4.13 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.54 0.51 0.45 0.46 0.55 0.56 0.46 0.50 0.52 0.40 0.37
2 0.54 1.00 0.53 0.38 0.51 0.47 0.48 0.50 0.57 0.61 0.46 0.41
3 0.51 0.53 1.00 0.41 0.57 0.48 0.47 0.52 0.56 0.52 0.46 0.42
4 0.45 0.38 0.41 1.00 0.41 0.53 0.50 0.36 0.43 0.39 0.35 0.32
5 0.46 0.51 0.57 0.41 1.00 0.47 0.48 0.59 0.55 0.57 0.55 0.45
6 0.55 0.47 0.48 0.53 0.47 1.00 0.56 0.44 0.46 0.44 0.37 0.36
7 0.56 0.48 0.47 0.50 0.48 0.56 1.00 0.45 0.53 0.49 0.40 0.38
8 0.46 0.50 0.52 0.36 0.59 0.44 0.45 1.00 0.51 0.51 0.55 0.46
9 0.50 0.57 0.56 0.43 0.55 0.46 0.53 0.51 1.00 0.61 0.49 0.42
10 0.52 0.61 0.52 0.39 0.57 0.44 0.49 0.51 0.61 1.00 0.47 0.38
11 0.40 0.46 0.46 0.35 0.55 0.37 0.40 0.55 0.49 0.47 1.00 0.52
12 0.37 0.41 0.42 0.32 0.45 0.36 0.38 0.46 0.42 0.38 0.52 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013