Download models Download Cα trajectory
Status: Done started: 2018-Feb-14 02:49:47 UTC
Project Nameb
SequenceAPCQVVLQGA ELNGILQAFA PLRTSLLDSL LVMGDRGILI HNTIFGEQVF LPLEHSQFSR YRWRGPTAAF LSLVDQKRSL LSVFRANQYP DLRRVELAIT GQAPFRTLVQ RIWTTTSDGE AVELASETLM KRELTSFVVL VPQGTPDVQL RLTRPQLTKV LNATGADSAT PTTFELGVNG KFSVFTTSTC VTFAAREEGV SSSTSTQVQI LSNALTKAGQ AAANAKTVYG ENTHRTFSVV VDDCSMRAVL RRLQVGGGTL KFFLTTPVPS LCVTATGPNA VSAVFL
Secondary structure

CCEEEEECCC HHHHCHHHHC CCCCCCCCCE EEEECCEEEE EEEECCEEEE EEECCCCCCC CCCCCCCEEE ECCCCCCCCC CHHHHCCCCC CCCCEEEEEC CCCCCEEEEE EEEEEEECCC CEEEEEEEEE EEECCCCCCC CCCCCCCEEE EECHHHHCCC CCCCCCCCCC CCEEECCCCC CCEEECCCCE EECEEEECCC CCCCCCCCCC CCCCCCCCCC HHHHHCEEEE EECCCCCCCC CCCCCHHHHH HHCCCCCEEE EEEEECCEEE EEEECCCCCC CEEEEC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Feb-14 06:46 UTC
Project Nameb
Cluster #123456789101112
Cluster density226.4208.2158.8153.3133.3100.398.484.661.961.259.556.8
Cluster size32930422021818413215014188798174
Average cluster RMSD1.51.51.41.41.41.31.51.71.41.31.41.3

Read about clustering method.

#123456789101112
RMSD 3.47 3.08 4.02 2.93 3.29 3.04 3.86 2.80 3.57 4.24 3.94 3.29
GDT_TS 0.59 0.60 0.55 0.61 0.59 0.60 0.54 0.67 0.63 0.57 0.54 0.61

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 2.77 3.15 2.40 2.60 2.31 2.63 3.05 3.13 2.62 2.41 3.14
2 2.77 0.00 3.70 2.74 3.22 3.02 3.04 2.34 2.60 3.66 2.83 2.28
3 3.15 3.70 0.00 3.46 2.73 3.57 2.40 3.79 4.58 4.47 3.24 4.55
4 2.40 2.74 3.46 0.00 2.86 2.03 3.05 2.93 3.30 3.26 2.84 2.97
5 2.60 3.22 2.73 2.86 0.00 2.59 2.88 3.35 4.05 3.67 3.19 3.89
6 2.31 3.02 3.57 2.03 2.59 0.00 3.26 3.18 3.48 3.09 3.20 3.27
7 2.63 3.04 2.40 3.05 2.88 3.26 0.00 3.30 3.78 3.67 2.35 3.74
8 3.05 2.34 3.79 2.93 3.35 3.18 3.30 0.00 2.47 3.85 3.19 2.52
9 3.13 2.60 4.58 3.30 4.05 3.48 3.78 2.47 0.00 3.36 3.32 2.07
10 2.62 3.66 4.47 3.26 3.67 3.09 3.67 3.85 3.36 0.00 3.14 3.39
11 2.41 2.83 3.24 2.84 3.19 3.20 2.35 3.19 3.32 3.14 0.00 3.21
12 3.14 2.28 4.55 2.97 3.89 3.27 3.74 2.52 2.07 3.39 3.21 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.70 0.74 0.71 0.71 0.76 0.70 0.66 0.68 0.73 0.68 0.69
2 0.70 1.00 0.65 0.72 0.65 0.70 0.66 0.69 0.70 0.69 0.67 0.73
3 0.74 0.65 1.00 0.67 0.70 0.70 0.73 0.64 0.62 0.68 0.69 0.60
4 0.71 0.72 0.67 1.00 0.65 0.74 0.63 0.69 0.69 0.69 0.65 0.71
5 0.71 0.65 0.70 0.65 1.00 0.67 0.66 0.63 0.59 0.66 0.65 0.59
6 0.76 0.70 0.70 0.74 0.67 1.00 0.66 0.64 0.67 0.74 0.64 0.67
7 0.70 0.66 0.73 0.63 0.66 0.66 1.00 0.62 0.62 0.69 0.74 0.60
8 0.66 0.69 0.64 0.69 0.63 0.64 0.62 1.00 0.71 0.64 0.61 0.71
9 0.68 0.70 0.62 0.69 0.59 0.67 0.62 0.71 1.00 0.69 0.62 0.79
10 0.73 0.69 0.68 0.69 0.66 0.74 0.69 0.64 0.69 1.00 0.66 0.69
11 0.68 0.67 0.69 0.65 0.65 0.64 0.74 0.61 0.62 0.66 1.00 0.62
12 0.69 0.73 0.60 0.71 0.59 0.67 0.60 0.71 0.79 0.69 0.62 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013