Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 13:23:07 UTC
Project Name299_2
SequenceMGRKPCCAKE GLNRGAWTAE EDKILTNYIK THGEGKWRSL PKRAGLNRCG KSCRLRWLNY LRPGIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLSKKLQGES PQPKHRMSNE AEKKSKTATP SPPLGTHGVV RTKAIRCTKV LFSEDQADLP HLPPNKCPPS TSPPQSNSDA SAQSPRGSDV SLSFLELLDI DDDEFQMDHD SAMSNVNSSD DLGGVTESSS GFWMESNIFQ PDFSGGAKVN CCILDPALEF ELKKFLASFL DSDDEWASWW LSEEH
Secondary structure

CCCCCCCCCC CCCCCCCCHH HHHHHHHHHH HCCCCCCCHH HHHHCCCCCC HHHHHHHHHH CCCCCCCCCC CHHHHHHHHH HHHHHCCCCH HHHHHCCCCC CCHHHHHHHC CCCCCCCCCC CCCCCCHHHH CCCCHHHHCC HHHHHHHHHH HHHHHHHHHH HCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCHH HHHHHHHHHH HHHHHHHHHC CCCCCCCCCC CCCCCCHHHH HHCCCCCCHH HHHHHCCCCC CCCCCCCCCC CHHHHHHHHH HCCCCCCCCC HHHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 18:21 UTC
Project Name299_2
Cluster #123456789101112
Cluster density130.7115.287.781.967.864.161.952.540.738.630.318.1
Cluster size3342882051811781681711311131058046
Average cluster RMSD2.62.52.32.22.62.62.82.52.82.72.62.5

Read about clustering method.

#123456789101112
RMSD 11.10 11.80 12.80 12.00 9.01 10.50 11.10 8.14 11.10 10.30 9.37 7.39
GDT_TS 0.34 0.33 0.33 0.31 0.35 0.34 0.33 0.36 0.33 0.38 0.35 0.39

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.24 5.33 4.62 5.14 4.58 3.69 6.20 4.15 4.65 5.70 7.28
2 4.24 0.00 4.80 4.76 5.60 4.59 4.24 6.73 3.90 5.29 5.71 7.91
3 5.33 4.80 0.00 4.26 7.24 6.33 6.28 8.32 6.44 6.76 7.82 8.89
4 4.62 4.76 4.26 0.00 6.69 5.53 5.80 7.84 5.68 6.17 6.97 8.28
5 5.14 5.60 7.24 6.69 0.00 4.36 5.09 4.04 5.18 5.36 4.54 5.39
6 4.58 4.59 6.33 5.53 4.36 0.00 4.53 5.86 4.43 5.30 4.31 7.02
7 3.69 4.24 6.28 5.80 5.09 4.53 0.00 6.07 3.77 4.22 5.39 7.78
8 6.20 6.73 8.32 7.84 4.04 5.86 6.07 0.00 6.18 5.82 5.32 4.62
9 4.15 3.90 6.44 5.68 5.18 4.43 3.77 6.18 0.00 5.00 4.89 7.94
10 4.65 5.29 6.76 6.17 5.36 5.30 4.22 5.82 5.00 0.00 5.44 7.63
11 5.70 5.71 7.82 6.97 4.54 4.31 5.39 5.32 4.89 5.44 0.00 6.93
12 7.28 7.91 8.89 8.28 5.39 7.02 7.78 4.62 7.94 7.63 6.93 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.55 0.45 0.50 0.49 0.53 0.58 0.42 0.58 0.51 0.49 0.41
2 0.55 1.00 0.46 0.47 0.44 0.49 0.53 0.45 0.58 0.49 0.47 0.39
3 0.45 0.46 1.00 0.53 0.37 0.39 0.41 0.35 0.42 0.37 0.39 0.36
4 0.50 0.47 0.53 1.00 0.37 0.43 0.41 0.33 0.43 0.42 0.39 0.36
5 0.49 0.44 0.37 0.37 1.00 0.50 0.47 0.52 0.45 0.46 0.57 0.47
6 0.53 0.49 0.39 0.43 0.50 1.00 0.51 0.42 0.51 0.48 0.53 0.43
7 0.58 0.53 0.41 0.41 0.47 0.51 1.00 0.43 0.55 0.55 0.47 0.41
8 0.42 0.45 0.35 0.33 0.52 0.42 0.43 1.00 0.41 0.44 0.51 0.52
9 0.58 0.58 0.42 0.43 0.45 0.51 0.55 0.41 1.00 0.49 0.48 0.36
10 0.51 0.49 0.37 0.42 0.46 0.48 0.55 0.44 0.49 1.00 0.43 0.42
11 0.49 0.47 0.39 0.39 0.57 0.53 0.47 0.51 0.48 0.43 1.00 0.45
12 0.41 0.39 0.36 0.36 0.47 0.43 0.41 0.52 0.36 0.42 0.45 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013