Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 00:23:44 UTC
Project Name299_1
SequenceMGRKPCCSKE GLNRGAWTAQ EDKILSNYIK THGEGKWRSL PQNAGLKRCG KSCRLRWLNY LRPDIKRGNI SPDEEDLIIR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKKLQADS SSSPSKMKEP LSTVGSVEKY RAPSPPANVI QTKAVRCTRT FFSQDSGLSG HLPDAVKSAP SSDSNDSPSS PANDGDDEDS EMNFVFLDDF DSGDFQFDID SAMSSVNSSD ELLFSSDANT DFFSQSGLDQ SFIMEDAVEL CSGRSEMGHF NLNSDLASFL NLEDDWAEEL ECDNE
Secondary structure

CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HCCCCCCCHH HHHHCCCCCH HHHHHHHHHH CCCCCCCCCC CHHHHHHHHH HHHHHCCCCH HHHHHCCCCC HHHHHHHHHC CCCCCCCCCC CCCCCCCCCH HHHHHHHHHH HCCHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCHHHHHH HHHHHHHHHH HHCCCCCCCC HHHHCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCHHHHHH HHHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 05:21 UTC
Project Name299_1
Cluster #123456789101112
Cluster density150.8127.0102.698.186.076.368.858.239.535.931.819.6
Cluster size34830024121519417114112783726840
Average cluster RMSD2.32.42.32.22.32.22.12.22.12.02.12.0

Read about clustering method.

#123456789101112
RMSD 12.90 13.20 12.00 12.10 11.30 9.59 8.36 8.11 7.81 9.54 6.86 7.31
GDT_TS 0.32 0.33 0.30 0.30 0.31 0.35 0.37 0.36 0.33 0.33 0.36 0.37

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 3.38 6.16 7.18 7.30 7.45 9.58 10.00 9.89 7.86 11.80 11.40
2 3.38 0.00 4.58 5.77 6.24 6.96 9.81 10.20 9.49 7.36 11.50 11.20
3 6.16 4.58 0.00 4.46 5.03 6.51 9.88 10.20 8.53 6.46 9.96 10.50
4 7.18 5.77 4.46 0.00 3.59 7.26 10.70 11.00 8.85 6.00 10.20 10.90
5 7.30 6.24 5.03 3.59 0.00 6.59 9.87 10.00 8.21 4.74 9.52 10.00
6 7.45 6.96 6.51 7.26 6.59 0.00 5.93 6.03 5.35 5.09 7.45 6.97
7 9.58 9.81 9.88 10.70 9.87 5.93 0.00 3.17 4.98 7.60 6.88 5.54
8 10.00 10.20 10.20 11.00 10.00 6.03 3.17 0.00 5.37 7.52 6.40 4.92
9 9.89 9.49 8.53 8.85 8.21 5.35 4.98 5.37 0.00 6.05 5.72 5.41
10 7.86 7.36 6.46 6.00 4.74 5.09 7.60 7.52 6.05 0.00 7.06 7.26
11 11.80 11.50 9.96 10.20 9.52 7.45 6.88 6.40 5.72 7.06 0.00 3.87
12 11.40 11.20 10.50 10.90 10.00 6.97 5.54 4.92 5.41 7.26 3.87 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.57 0.40 0.37 0.37 0.36 0.31 0.32 0.28 0.34 0.26 0.27
2 0.57 1.00 0.52 0.48 0.42 0.41 0.34 0.34 0.32 0.41 0.29 0.28
3 0.40 0.52 1.00 0.50 0.44 0.39 0.31 0.30 0.35 0.41 0.29 0.27
4 0.37 0.48 0.50 1.00 0.55 0.42 0.35 0.34 0.34 0.45 0.32 0.34
5 0.37 0.42 0.44 0.55 1.00 0.43 0.36 0.37 0.35 0.52 0.32 0.35
6 0.36 0.41 0.39 0.42 0.43 1.00 0.41 0.40 0.46 0.49 0.34 0.36
7 0.31 0.34 0.31 0.35 0.36 0.41 1.00 0.60 0.55 0.44 0.41 0.46
8 0.32 0.34 0.30 0.34 0.37 0.40 0.60 1.00 0.51 0.44 0.45 0.53
9 0.28 0.32 0.35 0.34 0.35 0.46 0.55 0.51 1.00 0.46 0.43 0.47
10 0.34 0.41 0.41 0.45 0.52 0.49 0.44 0.44 0.46 1.00 0.39 0.41
11 0.26 0.29 0.29 0.32 0.32 0.34 0.41 0.45 0.43 0.39 1.00 0.63
12 0.27 0.28 0.27 0.34 0.35 0.36 0.46 0.53 0.47 0.41 0.63 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013