Project Name | v7s7 |
Project Name | v7s7 |
Cluster # | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
Cluster density | 198.6 | 155.1 | 139.7 | 121.3 | 115.0 | 97.2 | 92.3 | 80.4 | 71.7 | 63.9 | 62.0 | 58.0 |
Cluster size | 264 | 225 | 196 | 187 | 212 | 169 | 164 | 129 | 137 | 105 | 102 | 110 |
Average cluster RMSD | 1.3 | 1.5 | 1.4 | 1.5 | 1.8 | 1.7 | 1.8 | 1.6 | 1.9 | 1.6 | 1.6 | 1.9 |
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
RMSD | 6.05 | 5.46 | 6.05 | 6.39 | 5.16 | 6.11 | 4.98 | 6.16 | 4.83 | 4.61 | 5.26 | 4.16 |
GDT_TS | 0.54 | 0.54 | 0.52 | 0.49 | 0.49 | 0.49 | 0.53 | 0.53 | 0.53 | 0.55 | 0.57 | 0.61 |
The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
1 | 0.00 | 1.41 | 1.80 | 1.81 | 4.31 | 2.48 | 3.18 | 2.47 | 3.97 | 3.65 | 2.70 | 3.67 |
2 | 1.41 | 0.00 | 1.68 | 1.84 | 4.32 | 2.32 | 3.06 | 2.73 | 3.70 | 3.42 | 2.42 | 3.14 |
3 | 1.80 | 1.68 | 0.00 | 1.86 | 4.26 | 2.24 | 3.31 | 2.69 | 3.79 | 3.53 | 3.08 | 4.04 |
4 | 1.81 | 1.84 | 1.86 | 0.00 | 4.68 | 2.16 | 3.40 | 2.52 | 4.10 | 3.72 | 3.30 | 3.92 |
5 | 4.31 | 4.32 | 4.26 | 4.68 | 0.00 | 4.87 | 2.82 | 4.43 | 2.89 | 3.47 | 4.31 | 4.70 |
6 | 2.48 | 2.32 | 2.24 | 2.16 | 4.87 | 0.00 | 3.73 | 3.28 | 4.52 | 3.94 | 3.51 | 3.52 |
7 | 3.18 | 3.06 | 3.31 | 3.40 | 2.82 | 3.73 | 0.00 | 3.76 | 2.41 | 3.06 | 3.78 | 3.73 |
8 | 2.47 | 2.73 | 2.69 | 2.52 | 4.43 | 3.28 | 3.76 | 0.00 | 4.12 | 4.19 | 2.47 | 4.06 |
9 | 3.97 | 3.70 | 3.79 | 4.10 | 2.89 | 4.52 | 2.41 | 4.12 | 0.00 | 3.34 | 4.20 | 3.96 |
10 | 3.65 | 3.42 | 3.53 | 3.72 | 3.47 | 3.94 | 3.06 | 4.19 | 3.34 | 0.00 | 4.15 | 3.75 |
11 | 2.70 | 2.42 | 3.08 | 3.30 | 4.31 | 3.51 | 3.78 | 2.47 | 4.20 | 4.15 | 0.00 | 3.16 |
12 | 3.67 | 3.14 | 4.04 | 3.92 | 4.70 | 3.52 | 3.73 | 4.06 | 3.96 | 3.75 | 3.16 | 0.00 |
The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.
# | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
1 | 1.00 | 0.85 | 0.80 | 0.78 | 0.68 | 0.73 | 0.78 | 0.79 | 0.69 | 0.62 | 0.76 | 0.69 |
2 | 0.85 | 1.00 | 0.81 | 0.84 | 0.64 | 0.74 | 0.78 | 0.72 | 0.72 | 0.64 | 0.83 | 0.67 |
3 | 0.80 | 0.81 | 1.00 | 0.82 | 0.64 | 0.79 | 0.72 | 0.76 | 0.69 | 0.63 | 0.73 | 0.65 |
4 | 0.78 | 0.84 | 0.82 | 1.00 | 0.66 | 0.79 | 0.77 | 0.76 | 0.69 | 0.64 | 0.69 | 0.66 |
5 | 0.68 | 0.64 | 0.64 | 0.66 | 1.00 | 0.64 | 0.68 | 0.64 | 0.68 | 0.68 | 0.61 | 0.60 |
6 | 0.73 | 0.74 | 0.79 | 0.79 | 0.64 | 1.00 | 0.70 | 0.70 | 0.65 | 0.64 | 0.65 | 0.65 |
7 | 0.78 | 0.78 | 0.72 | 0.77 | 0.68 | 0.70 | 1.00 | 0.70 | 0.77 | 0.68 | 0.69 | 0.66 |
8 | 0.79 | 0.72 | 0.76 | 0.76 | 0.64 | 0.70 | 0.70 | 1.00 | 0.68 | 0.62 | 0.73 | 0.69 |
9 | 0.69 | 0.72 | 0.69 | 0.69 | 0.68 | 0.65 | 0.77 | 0.68 | 1.00 | 0.63 | 0.63 | 0.69 |
10 | 0.62 | 0.64 | 0.63 | 0.64 | 0.68 | 0.64 | 0.68 | 0.62 | 0.63 | 1.00 | 0.59 | 0.64 |
11 | 0.76 | 0.83 | 0.73 | 0.69 | 0.61 | 0.65 | 0.69 | 0.73 | 0.63 | 0.59 | 1.00 | 0.69 |
12 | 0.69 | 0.67 | 0.65 | 0.66 | 0.60 | 0.65 | 0.66 | 0.69 | 0.69 | 0.64 | 0.69 | 1.00 |
The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.
© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013