Download models Download Cα trajectory
Status: Done started: 2018-May-11 07:54:23 UTC
Project Namev7s7
SequenceMVLLCNWVYT QYKWHNLDCI DESPNRWWRK GTFEMEV
Secondary structure

CEEECCCEEE EECCCCEEEE EECCCCCCCC CCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-11 12:18 UTC
Project Namev7s7
Cluster #123456789101112
Cluster density198.6155.1139.7121.3115.097.292.380.471.763.962.058.0
Cluster size264225196187212169164129137105102110
Average cluster RMSD1.31.51.41.51.81.71.81.61.91.61.61.9

Read about clustering method.

#123456789101112
RMSD 6.05 5.46 6.05 6.39 5.16 6.11 4.98 6.16 4.83 4.61 5.26 4.16
GDT_TS 0.54 0.54 0.52 0.49 0.49 0.49 0.53 0.53 0.53 0.55 0.57 0.61

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 1.41 1.80 1.81 4.31 2.48 3.18 2.47 3.97 3.65 2.70 3.67
2 1.41 0.00 1.68 1.84 4.32 2.32 3.06 2.73 3.70 3.42 2.42 3.14
3 1.80 1.68 0.00 1.86 4.26 2.24 3.31 2.69 3.79 3.53 3.08 4.04
4 1.81 1.84 1.86 0.00 4.68 2.16 3.40 2.52 4.10 3.72 3.30 3.92
5 4.31 4.32 4.26 4.68 0.00 4.87 2.82 4.43 2.89 3.47 4.31 4.70
6 2.48 2.32 2.24 2.16 4.87 0.00 3.73 3.28 4.52 3.94 3.51 3.52
7 3.18 3.06 3.31 3.40 2.82 3.73 0.00 3.76 2.41 3.06 3.78 3.73
8 2.47 2.73 2.69 2.52 4.43 3.28 3.76 0.00 4.12 4.19 2.47 4.06
9 3.97 3.70 3.79 4.10 2.89 4.52 2.41 4.12 0.00 3.34 4.20 3.96
10 3.65 3.42 3.53 3.72 3.47 3.94 3.06 4.19 3.34 0.00 4.15 3.75
11 2.70 2.42 3.08 3.30 4.31 3.51 3.78 2.47 4.20 4.15 0.00 3.16
12 3.67 3.14 4.04 3.92 4.70 3.52 3.73 4.06 3.96 3.75 3.16 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.85 0.80 0.78 0.68 0.73 0.78 0.79 0.69 0.62 0.76 0.69
2 0.85 1.00 0.81 0.84 0.64 0.74 0.78 0.72 0.72 0.64 0.83 0.67
3 0.80 0.81 1.00 0.82 0.64 0.79 0.72 0.76 0.69 0.63 0.73 0.65
4 0.78 0.84 0.82 1.00 0.66 0.79 0.77 0.76 0.69 0.64 0.69 0.66
5 0.68 0.64 0.64 0.66 1.00 0.64 0.68 0.64 0.68 0.68 0.61 0.60
6 0.73 0.74 0.79 0.79 0.64 1.00 0.70 0.70 0.65 0.64 0.65 0.65
7 0.78 0.78 0.72 0.77 0.68 0.70 1.00 0.70 0.77 0.68 0.69 0.66
8 0.79 0.72 0.76 0.76 0.64 0.70 0.70 1.00 0.68 0.62 0.73 0.69
9 0.69 0.72 0.69 0.69 0.68 0.65 0.77 0.68 1.00 0.63 0.63 0.69
10 0.62 0.64 0.63 0.64 0.68 0.64 0.68 0.62 0.63 1.00 0.59 0.64
11 0.76 0.83 0.73 0.69 0.61 0.65 0.69 0.73 0.63 0.59 1.00 0.69
12 0.69 0.67 0.65 0.66 0.60 0.65 0.66 0.69 0.69 0.64 0.69 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013