Download models Download Cα trajectory
Status: Done started: 2017-Sep-13 21:19:26 UTC
Project Name389_3
SequenceMMKGEMEGEN QNNEYKKGLW TVEEDKILMD YVKEHGKGKW NRIAKVTGLK RCGKSCRLRW MNYLSPNVKR GDFSEEEEDL IIRLHKLLGN RWSLIAGRVP GRTDNQVKNY WNTHLSKKLG IKKGNGKASA SSSQRTSPKS ESSTSTSPST SSSEGNSSSD HKGSETDPST IPSSDTGSCL SGSLTELAST EDLEMETEDY ESSFWFDWEA LNNHQRYVIG EWYESDLNLN FPSLMEFLEL GHSYPLDFVW DGLLLELTYD LIML
Secondary structure

CHHHHHHHHC CCCCCCCCCC CCHHHHHHHH HHHHCCCCCH HHHHHHHCCC CCHHHHHHHH HHHCCCCCCC CCCCHHHHHH HHHHHHHHCC CCHHHHHHCC CCCHHHHHHH HHCCCCCCCC CCCCCCCCHH HHHCCCCHHH HHHHHHHHHH HHHHHHHHHH HHHHCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHHHHHHC CCCCCCCCCC CCHHHHHHHC CCCCCCCCCC CCCCCCCCHH HHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 02:13 UTC
Project Name389_3
Cluster #123456789101112
Cluster density156.8152.2136.9107.094.891.685.779.762.359.956.035.1
Cluster size31526325118216815514213710010611368
Average cluster RMSD2.01.71.81.71.81.71.71.71.61.82.01.9

Read about clustering method.

#123456789101112
RMSD 10.20 11.00 10.30 10.40 10.20 8.52 11.80 10.60 11.00 7.95 9.85 8.14
GDT_TS 0.35 0.32 0.37 0.32 0.33 0.34 0.31 0.33 0.35 0.35 0.34 0.41

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.69 3.58 4.78 4.51 3.81 4.71 4.49 4.41 4.67 6.82 7.16
2 4.69 0.00 3.51 3.24 3.72 6.30 4.14 4.02 3.93 6.65 8.80 8.88
3 3.58 3.51 0.00 4.16 4.03 5.04 4.40 4.30 4.20 5.65 8.02 7.90
4 4.78 3.24 4.16 0.00 3.39 5.98 4.54 4.35 4.14 6.17 8.17 8.16
5 4.51 3.72 4.03 3.39 0.00 5.64 3.55 2.96 2.85 6.25 8.65 8.59
6 3.81 6.30 5.04 5.98 5.64 0.00 6.26 5.87 6.01 3.18 6.72 6.44
7 4.71 4.14 4.40 4.54 3.55 6.26 0.00 3.80 3.12 7.20 9.44 9.69
8 4.49 4.02 4.30 4.35 2.96 5.87 3.80 0.00 2.50 6.74 9.23 9.14
9 4.41 3.93 4.20 4.14 2.85 6.01 3.12 2.50 0.00 6.90 9.24 9.22
10 4.67 6.65 5.65 6.17 6.25 3.18 7.20 6.74 6.90 0.00 5.67 5.43
11 6.82 8.80 8.02 8.17 8.65 6.72 9.44 9.23 9.24 5.67 0.00 4.18
12 7.16 8.88 7.90 8.16 8.59 6.44 9.69 9.14 9.22 5.43 4.18 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.48 0.58 0.48 0.49 0.54 0.47 0.52 0.53 0.50 0.43 0.43
2 0.48 1.00 0.54 0.55 0.52 0.37 0.51 0.52 0.51 0.38 0.31 0.31
3 0.58 0.54 1.00 0.48 0.49 0.45 0.47 0.48 0.51 0.42 0.34 0.36
4 0.48 0.55 0.48 1.00 0.58 0.38 0.46 0.50 0.50 0.38 0.34 0.31
5 0.49 0.52 0.49 0.58 1.00 0.42 0.54 0.61 0.62 0.39 0.34 0.32
6 0.54 0.37 0.45 0.38 0.42 1.00 0.38 0.42 0.42 0.62 0.44 0.43
7 0.47 0.51 0.47 0.46 0.54 0.38 1.00 0.53 0.61 0.34 0.31 0.29
8 0.52 0.52 0.48 0.50 0.61 0.42 0.53 1.00 0.66 0.38 0.33 0.33
9 0.53 0.51 0.51 0.50 0.62 0.42 0.61 0.66 1.00 0.38 0.34 0.34
10 0.50 0.38 0.42 0.38 0.39 0.62 0.34 0.38 0.38 1.00 0.46 0.46
11 0.43 0.31 0.34 0.34 0.34 0.44 0.31 0.33 0.34 0.46 1.00 0.50
12 0.43 0.31 0.36 0.31 0.32 0.43 0.29 0.33 0.34 0.46 0.50 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013