Download models Download Cα trajectory
Status: Done started: 2017-Sep-13 21:17:27 UTC
Project Name389_0
SequenceMMKGEMEGEN QNNEYKKGLW TVEEDKILMD YVKEHGKGKW NRIAKVTGLK RCGKSCRLRW MNYLSPNVKR GDFSEEEEDL IIRLHKLLGN RWSLIAGRVP GRTDNQVKNY WNTHLSKKLG IKKGNGKASA SSSQRTSPKS ESSTSTSPST SSSEGNSSSD HNGSETEPSV DPSSDTGSCL SGSLTELEST EDLEMETDDY ESSFWFDWEA LDNHQNYVIG EWYNSDLELN FPSLMEFLEL GHSYPLDFVW DGLLLELTYD LIML
Secondary structure

CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHHCCCCH HHHHHHHCCC CCHHHHHHHH HHHCCCCCCC CCCCHHHHHH HHHHHHHHCC CCHHHHHHCC CCCHHHHHHH HHCCCCCCCC CCCCCCCCCH HHHCCCCHHH HHHHHHHHHH HHHHHHHHHH HHHHCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHHHHHHC CCCCCCCCCC HHHHHHHHCC CCCCCCCCCC CCCCCCCCCC CCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 02:11 UTC
Project Name389_0
Cluster #123456789101112
Cluster density130.9121.2111.0107.986.483.583.082.065.845.745.739.8
Cluster size275231210220160164177184148798270
Average cluster RMSD2.11.91.92.01.92.02.12.22.21.71.81.8

Read about clustering method.

#123456789101112
RMSD 12.20 13.00 12.20 13.70 11.80 11.50 10.70 10.80 11.40 11.60 8.60 7.72
GDT_TS 0.33 0.32 0.33 0.28 0.35 0.34 0.35 0.33 0.35 0.32 0.38 0.44

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.67 4.28 5.83 3.65 5.12 4.07 5.45 4.68 4.71 6.74 8.53
2 4.67 0.00 5.39 3.58 5.76 5.95 6.45 6.33 5.49 5.06 7.92 9.89
3 4.28 5.39 0.00 6.32 3.88 4.55 5.10 4.80 3.59 3.26 7.12 9.28
4 5.83 3.58 6.32 0.00 6.72 6.28 7.12 7.26 5.77 5.95 8.43 10.60
5 3.65 5.76 3.88 6.72 0.00 4.51 4.39 4.73 4.33 3.89 6.69 8.59
6 5.12 5.95 4.55 6.28 4.51 0.00 5.44 3.80 3.22 3.83 6.04 8.40
7 4.07 6.45 5.10 7.12 4.39 5.44 0.00 6.18 5.13 5.65 6.01 7.76
8 5.45 6.33 4.80 7.26 4.73 3.80 6.18 0.00 3.97 4.03 5.09 7.10
9 4.68 5.49 3.59 5.77 4.33 3.22 5.13 3.97 0.00 3.03 6.00 8.25
10 4.71 5.06 3.26 5.95 3.89 3.83 5.65 4.03 3.03 0.00 6.44 8.55
11 6.74 7.92 7.12 8.43 6.69 6.04 6.01 5.09 6.00 6.44 0.00 4.70
12 8.53 9.89 9.28 10.60 8.59 8.40 7.76 7.10 8.25 8.55 4.70 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.49 0.47 0.45 0.54 0.43 0.54 0.40 0.47 0.46 0.37 0.35
2 0.49 1.00 0.44 0.62 0.41 0.41 0.45 0.39 0.45 0.48 0.37 0.35
3 0.47 0.44 1.00 0.38 0.55 0.49 0.45 0.45 0.55 0.59 0.38 0.34
4 0.45 0.62 0.38 1.00 0.40 0.40 0.41 0.36 0.45 0.42 0.36 0.34
5 0.54 0.41 0.55 0.40 1.00 0.47 0.52 0.46 0.55 0.57 0.40 0.37
6 0.43 0.41 0.49 0.40 0.47 1.00 0.42 0.55 0.62 0.58 0.46 0.42
7 0.54 0.45 0.45 0.41 0.52 0.42 1.00 0.38 0.45 0.45 0.40 0.36
8 0.40 0.39 0.45 0.36 0.46 0.55 0.38 1.00 0.53 0.50 0.50 0.42
9 0.47 0.45 0.55 0.45 0.55 0.62 0.45 0.53 1.00 0.63 0.48 0.41
10 0.46 0.48 0.59 0.42 0.57 0.58 0.45 0.50 0.63 1.00 0.44 0.38
11 0.37 0.37 0.38 0.36 0.40 0.46 0.40 0.50 0.48 0.44 1.00 0.54
12 0.35 0.35 0.34 0.34 0.37 0.42 0.36 0.42 0.41 0.38 0.54 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013