Download models Download Cα trajectory
Status: Done started: 2017-Sep-13 21:15:26 UTC
Project Name516_3
SequenceMGRKPCCKEG LNRGAWTAQE DKILVNYIKT HGEGKWRSLP KRAGLKRCGK SCRLRWLNYL RPGIKRGNIS PDEEELIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNTT LSKKLQGQSS QPPVNMSNAE AVSKVADPGS GSPHVVVRTK AIRCPPDAAL LVAPPATSPP QSNLDCSAAD SDQEDLSCDF LMLLDFDIDE FQDDDSSSSS VNSSDDLLML DEAQTEFWME SDQFQCDILG GAKLCGRSEG LEFDLTSSFL GASWWESEEH
Secondary structure

CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HCCCCCCHHH HHCCCCCHHH HHHHHHHHHC CCCCCCCCCC HHHHHHHHHH HHHHCCCCHH HHHHCCCCCH HHHHHHHHCC CCCCCCCCCC CCCCCCCCCC CCCCCHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HHHHHCCCCC CCHHHHCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 02:10 UTC
Project Name516_3
Cluster #123456789101112
Cluster density136.0106.7102.288.688.386.983.474.673.869.457.051.8
Cluster size25824222415717016916915313611312881
Average cluster RMSD1.92.32.21.81.91.92.02.11.81.62.21.6

Read about clustering method.

#123456789101112
RMSD 13.40 11.60 14.30 13.50 11.70 13.90 13.20 10.10 10.20 12.30 9.75 13.10
GDT_TS 0.40 0.37 0.37 0.38 0.39 0.38 0.39 0.39 0.36 0.35 0.38 0.39

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 5.27 3.90 3.67 5.20 3.40 4.10 7.82 7.67 3.52 8.59 3.23
2 5.27 0.00 6.54 5.57 4.00 5.94 4.89 4.68 4.50 5.07 6.52 5.28
3 3.90 6.54 0.00 4.37 6.20 3.71 4.83 8.51 8.99 4.63 9.24 4.23
4 3.67 5.57 4.37 0.00 5.39 4.23 3.33 7.49 8.18 3.42 8.43 3.00
5 5.20 4.00 6.20 5.39 0.00 5.32 4.32 5.89 5.98 4.95 7.01 5.17
6 3.40 5.94 3.71 4.23 5.32 0.00 4.38 8.15 8.23 4.30 9.13 4.14
7 4.10 4.89 4.83 3.33 4.32 4.38 0.00 6.82 7.19 3.88 7.80 3.43
8 7.82 4.68 8.51 7.49 5.89 8.15 6.82 0.00 5.03 6.78 4.86 7.49
9 7.67 4.50 8.99 8.18 5.98 8.23 7.19 5.03 0.00 7.50 6.72 7.85
10 3.52 5.07 4.63 3.42 4.95 4.30 3.88 6.78 7.50 0.00 7.50 3.27
11 8.59 6.52 9.24 8.43 7.01 9.13 7.80 4.86 6.72 7.50 0.00 8.11
12 3.23 5.28 4.23 3.00 5.17 4.14 3.43 7.49 7.85 3.27 8.11 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.44 0.55 0.55 0.44 0.56 0.51 0.36 0.37 0.56 0.38 0.58
2 0.44 1.00 0.39 0.42 0.51 0.40 0.50 0.54 0.53 0.43 0.44 0.44
3 0.55 0.39 1.00 0.54 0.41 0.58 0.49 0.35 0.33 0.49 0.36 0.51
4 0.55 0.42 0.54 1.00 0.45 0.56 0.56 0.38 0.39 0.56 0.37 0.61
5 0.44 0.51 0.41 0.45 1.00 0.41 0.54 0.43 0.42 0.46 0.44 0.47
6 0.56 0.40 0.58 0.56 0.41 1.00 0.51 0.35 0.33 0.54 0.35 0.54
7 0.51 0.50 0.49 0.56 0.54 0.51 1.00 0.43 0.40 0.51 0.42 0.55
8 0.36 0.54 0.35 0.38 0.43 0.35 0.43 1.00 0.46 0.37 0.53 0.39
9 0.37 0.53 0.33 0.39 0.42 0.33 0.40 0.46 1.00 0.35 0.41 0.36
10 0.56 0.43 0.49 0.56 0.46 0.54 0.51 0.37 0.35 1.00 0.39 0.61
11 0.38 0.44 0.36 0.37 0.44 0.35 0.42 0.53 0.41 0.39 1.00 0.40
12 0.58 0.44 0.51 0.61 0.47 0.54 0.55 0.39 0.36 0.61 0.40 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013