Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 00:23:48 UTC
Project Name299_4
SequenceMGRKPCCAKE GLNRGAWTAE EDKILTNYIK THGEGKWRSL PKKAGLNRCG KSCRLRWLNY LRPGIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLSKKLQGGS PQPKPNMSNE AEAKSKSADP LSPGSTHVVV RTKAIRCTKV LFSPDVADLV HLPSNSAPSA TSPPQSNLDT SAASSVQDDV SCDFLMLLDI DIDEFQLDDD SAMSDVNSSD DLGMLDELDI EFWMESDSFQ CDFLGGAHLS CCELAPGLEF DLTKCLASFL EADDEWAGWW LSEED
Secondary structure

CCHHHHHCCH HHHCCCCCHH HHHHHHHHHH HCCCCCCCHH HHHHCCCCCH HHHHHHHHHH CCCCCCCCCC CHHHHHHHHH HHHHHCCCCH HHHHHCCCCC CCHHHHHHHC CCCCCCCCCC CCCCCCCCCC CCCHHHHHHH HHHHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCHHHHHH HHHHHHHHHH HHHHHCCCCC CCCCCCCCCC CCCCCCCCCH HHHHHCCCCC CCCCCCCCCH HHHHCCCCCC CCCCHHHHHH CCCCCCCHHH HHHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 05:21 UTC
Project Name299_4
Cluster #123456789101112
Cluster density133.1122.4112.8108.9100.594.363.462.258.257.952.949.7
Cluster size29222921920819218611512911711710492
Average cluster RMSD2.21.91.91.91.92.01.82.12.02.02.01.9

Read about clustering method.

#123456789101112
RMSD 9.98 10.80 9.50 8.29 9.56 8.21 9.76 7.28 9.50 9.83 9.65 7.20
GDT_TS 0.35 0.32 0.34 0.34 0.35 0.36 0.35 0.40 0.33 0.36 0.35 0.36

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 4.07 4.19 5.20 3.27 5.31 4.34 6.28 2.78 3.00 2.98 5.48
2 4.07 0.00 5.32 6.03 5.17 6.05 4.34 6.67 4.07 4.30 4.66 6.38
3 4.19 5.32 0.00 3.52 3.53 4.68 4.06 5.74 4.58 4.77 3.65 4.83
4 5.20 6.03 3.52 0.00 4.51 3.66 4.61 4.70 4.99 5.36 4.39 3.58
5 3.27 5.17 3.53 4.51 0.00 5.52 4.54 6.07 4.08 4.47 3.24 5.10
6 5.31 6.05 4.68 3.66 5.52 0.00 4.67 4.91 4.62 5.57 4.96 3.51
7 4.34 4.34 4.06 4.61 4.54 4.67 0.00 5.76 4.07 4.84 4.21 5.20
8 6.28 6.67 5.74 4.70 6.07 4.91 5.76 0.00 5.86 6.08 5.71 3.31
9 2.78 4.07 4.58 4.99 4.08 4.62 4.07 5.86 0.00 3.32 3.72 5.22
10 3.00 4.30 4.77 5.36 4.47 5.57 4.84 6.08 3.32 0.00 3.67 5.61
11 2.98 4.66 3.65 4.39 3.24 4.96 4.21 5.71 3.72 3.67 0.00 4.82
12 5.48 6.38 4.83 3.58 5.10 3.51 5.20 3.31 5.22 5.61 4.82 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.50 0.50 0.43 0.58 0.45 0.50 0.41 0.65 0.60 0.59 0.45
2 0.50 1.00 0.43 0.42 0.45 0.43 0.52 0.44 0.56 0.53 0.47 0.42
3 0.50 0.43 1.00 0.58 0.57 0.53 0.50 0.41 0.49 0.49 0.57 0.50
4 0.43 0.42 0.58 1.00 0.49 0.57 0.48 0.47 0.43 0.44 0.56 0.57
5 0.58 0.45 0.57 0.49 1.00 0.48 0.48 0.42 0.53 0.53 0.60 0.48
6 0.45 0.43 0.53 0.57 0.48 1.00 0.51 0.48 0.46 0.46 0.54 0.58
7 0.50 0.52 0.50 0.48 0.48 0.51 1.00 0.44 0.51 0.49 0.49 0.46
8 0.41 0.44 0.41 0.47 0.42 0.48 0.44 1.00 0.44 0.43 0.43 0.56
9 0.65 0.56 0.49 0.43 0.53 0.46 0.51 0.44 1.00 0.59 0.56 0.45
10 0.60 0.53 0.49 0.44 0.53 0.46 0.49 0.43 0.59 1.00 0.53 0.45
11 0.59 0.47 0.57 0.56 0.60 0.54 0.49 0.43 0.56 0.53 1.00 0.53
12 0.45 0.42 0.50 0.57 0.48 0.58 0.46 0.56 0.45 0.45 0.53 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013