Download models Download Cα trajectory
Status: Done started: 2018-Dec-03 05:29:05 UTC
Project Name
SequenceMQLKPMEINP EMLNKVLSRL GVAGQWRFVD VLGLEEESLG SVPAPACALL LLFPLTAQHE NFRKKQIEEL KGQEVSPKVY FMKQTIGNSC GTIGLIHAVA NNQDKLGFED GSVLKQFLSE TEKMSPEDRA KCFEKNEAIQ AAHDAVAQEG QCRVDDKVNF HFILFNNVDG HLYELDGRMP FPVNHGASSE DTLLKDAAKV CREFTEREQG EVRFSAVALC KAA
Secondary structure

CCCCCCCCCH HHHHHHHHHC CCCCCEEEEE CCCCCCCCCC CCCCCEEEEE EEEECCHHHH HHHHHHHHHH CCCCCCCCCC CCCCCCCCCH HHHHHHHHHH CCCCCCCCCC CCHHHHHHHH CCCCCHHHHH HHHHHCHHHH HHHHHHHCCC CCCCCCCCCE EEEEEEEECC EEEEECCCCC CCEEEEECCC CCHHHHHHHH HHHHHHCCCC CCCCEEEEEE ECC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Dec-03 09:17 UTC
Project Name
Cluster #123456789101112
Cluster density215.2144.8136.8136.0134.2131.2121.8117.1106.795.090.278.4
Cluster size27018218519218117615817314613311094
Average cluster RMSD1.31.31.41.41.31.31.31.51.41.41.21.2

Read about clustering method.

#123456789101112
RMSD 2.48 2.64 2.74 2.77 2.92 2.95 2.63 2.91 3.04 2.85 2.68 2.33
GDT_TS 0.68 0.67 0.67 0.68 0.65 0.68 0.68 0.66 0.66 0.66 0.65 0.70

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 1.72 2.79 2.55 2.32 2.86 1.82 2.63 2.09 2.68 2.14 2.00
2 1.72 0.00 2.84 2.68 2.23 2.78 2.09 2.62 2.12 2.55 1.88 1.96
3 2.79 2.84 0.00 2.88 2.73 2.01 2.63 2.54 2.72 2.24 2.93 2.42
4 2.55 2.68 2.88 0.00 2.75 2.92 2.54 2.37 2.77 2.57 2.76 2.34
5 2.32 2.23 2.73 2.75 0.00 2.90 2.27 2.75 2.09 2.16 2.26 2.34
6 2.86 2.78 2.01 2.92 2.90 0.00 2.62 2.20 2.72 2.39 2.90 2.65
7 1.82 2.09 2.63 2.54 2.27 2.62 0.00 2.47 2.06 2.29 2.11 1.99
8 2.63 2.62 2.54 2.37 2.75 2.20 2.47 0.00 2.67 2.48 2.77 2.31
9 2.09 2.12 2.72 2.77 2.09 2.72 2.06 2.67 0.00 2.12 2.49 2.48
10 2.68 2.55 2.24 2.57 2.16 2.39 2.29 2.48 2.12 0.00 2.66 2.29
11 2.14 1.88 2.93 2.76 2.26 2.90 2.11 2.77 2.49 2.66 0.00 2.08
12 2.00 1.96 2.42 2.34 2.34 2.65 1.99 2.31 2.48 2.29 2.08 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.80 0.64 0.71 0.71 0.68 0.77 0.67 0.72 0.66 0.74 0.77
2 0.80 1.00 0.65 0.69 0.75 0.68 0.74 0.68 0.73 0.68 0.77 0.79
3 0.64 0.65 1.00 0.68 0.67 0.73 0.66 0.71 0.67 0.73 0.61 0.68
4 0.71 0.69 0.68 1.00 0.69 0.69 0.72 0.72 0.69 0.70 0.69 0.75
5 0.71 0.75 0.67 0.69 1.00 0.67 0.70 0.66 0.77 0.72 0.72 0.72
6 0.68 0.68 0.73 0.69 0.67 1.00 0.70 0.77 0.69 0.73 0.65 0.68
7 0.77 0.74 0.66 0.72 0.70 0.70 1.00 0.68 0.72 0.71 0.73 0.74
8 0.67 0.68 0.71 0.72 0.66 0.77 0.68 1.00 0.67 0.69 0.65 0.71
9 0.72 0.73 0.67 0.69 0.77 0.69 0.72 0.67 1.00 0.74 0.70 0.69
10 0.66 0.68 0.73 0.70 0.72 0.73 0.71 0.69 0.74 1.00 0.66 0.70
11 0.74 0.77 0.61 0.69 0.72 0.65 0.73 0.65 0.70 0.66 1.00 0.75
12 0.77 0.79 0.68 0.75 0.72 0.68 0.74 0.71 0.69 0.70 0.75 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013